| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1901 |
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| Symbol | |
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| ID | 7315231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2026521 |
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| End bp | 2027903 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616792 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_002513969 |
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| Protein GI | 220935070 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG TGACCATCAT CGACCAATTC CTCAACACAT TCGCCGCCTA CATCGACTCG
GGTTTCGGGC TGCTGCGGGG CGAAGTAGCG TTCCTCACGG CCACGCTGAT CGTCATCGAC
ATGACGATCG CCGGCCTGTA TTGGGCCATG AGCCATGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGCTGCGCAA GGTGCTCTAC GTCGGTGCCT TCGCCTACAT CATCGGCAAC
TTCAACTGGC TGGCCAGCAT CGTGTTCCGC TCGTTTGCGG GATTGGGTAT CACCGCCACC
GGCTCGGCAA TCACGATGGA GAACTTCTTG CAGCCGGGCC GACTGGCGAA AACCGGCCTT
GACGCGGGCG GGCCTATCTT CCTTCAGCTT GACGACATGA TGGGATTTCC CGAGGTGTTC
TTGAACCTCG ATGCCATCTT GGTGCTGTTC CTCGCCTGGC TGGTCGTGGT GCTCTGCTTC
TTCGTGCTGG CGATCCAGCT TTTCATCACG CTGATCGAAT TCAAGCTGAC CACGCTCGCA
GGCTTTGTGC TGGTGCCGTT CGCGCTGTGG AACAAGACGA GCTTTCTGGC GGAAAAAGTG
CTGGGCAACG TCGTGGCCTC CGGCGTCAAG GTGCTGGTGT TGGCCGTGAT TGTCGGTATC
GGCTCGGGTC TGTTCACCCA GTTCCAAGTC CATCCCGATG AGCCGTCCCT CGACCATGCG
CTGGTCATCA TGCTGGCCTC GCTCACTTTG CTGGCGCTGG GGATCTTCGG CCCCGGCATC
GCCACGGGCC TTGTGTCCGG TGCGCCGCAG CTCGGCGCGG GCGCGATGGC GGGCGCGGCC
ATCGGCGCAG CCGGAACGGC GGTGGCCGTC GGTGCCGCCG CGACGGGCGT GGGCAGTGCG
GTAGCTGCTG GCGCGCGCAT GGCCCCGGCC GCCGCCAAGC TGGCCGGCAG CGGCGCGCGT
GCCGCCACGT CGGCGGCGGG CAGCGCGAAG TCGGCGTTCC AGGCCGGTTC CGCCGCAGCA
GGCGGCGGTG CCAAAGGCGC GATGGCGGGC TTGGGCAACG TCGCCAAGAC CGGCGCGCAG
GCAGCCGGAC GAGGCGCTGC ATCCCGTGCC TCCGCTGTCG GGCAGCGCAT GGCCGCTCCG
TTCCGTGCTG GCTGGAATGG CGCTGCGGCC GACAGTGGCG CAGGGGCGGC ATCCGGTCAG
GGAGTTGGCG AGGCCACGCC CAGCGCCAGC AACGCGCAGA CGCAGGAACA ACCTGCCTGG
GCGAAACGAC TGCATCGCCG CCAACAGCTC ACCCATGCCG CGACCACCAC CGCCCATGCG
CTGCGCGGTG GCGACGGCGG CGGCTCCGGC CAAGGGCCGA GCCTGCGCGA TTCCGATTCA
TAA
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| Protein sequence | MNDVTIIDQF LNTFAAYIDS GFGLLRGEVA FLTATLIVID MTIAGLYWAM SHATGQGEDV
IAKLLRKVLY VGAFAYIIGN FNWLASIVFR SFAGLGITAT GSAITMENFL QPGRLAKTGL
DAGGPIFLQL DDMMGFPEVF LNLDAILVLF LAWLVVVLCF FVLAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTSFLAEKV LGNVVASGVK VLVLAVIVGI GSGLFTQFQV HPDEPSLDHA
LVIMLASLTL LALGIFGPGI ATGLVSGAPQ LGAGAMAGAA IGAAGTAVAV GAAATGVGSA
VAAGARMAPA AAKLAGSGAR AATSAAGSAK SAFQAGSAAA GGGAKGAMAG LGNVAKTGAQ
AAGRGAASRA SAVGQRMAAP FRAGWNGAAA DSGAGAASGQ GVGEATPSAS NAQTQEQPAW
AKRLHRRQQL THAATTTAHA LRGGDGGGSG QGPSLRDSDS
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