Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1897 |
Symbol | |
ID | 7315227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 2022732 |
End bp | 2023004 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643616788 |
Product | putative conjugal transfer TrbD transmembrane protein |
Protein accession | YP_002513965 |
Protein GI | 220935066 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5268] Type IV secretory pathway, TrbD component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCC CGGACACCTT CGCGGCCGGG TTCGAGGTGC CGCTGCATCG CTCGCTCACC GAGCCGATCT TGCTGGGCGG CGCACCGCGC ACCGTGGCGA TCGCCAACGG CACGCTGGCC GCCGCCGTCG GGCTGGGCCT GCAACTGTGG ATTCCGGGCG TGGTGCTCTG GATCGTCGGC CATTCGCTGG CGGTGTGGGG TGCGCGCGTC GATCCTCAGT TCATGGCCGT GTTCGCCCGG CACATCAAGC ATCGCCCGCT GCTGGACGTG TGA
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Protein sequence | MSGPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV
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