| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1883 |
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| Symbol | |
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| ID | 7315213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2005518 |
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| End bp | 2007629 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643616774 |
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| Product | hypothetical protein |
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| Protein accession | YP_002513951 |
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| Protein GI | 220935052 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.239499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGAGTGG CGCGGCACGC AGCGGCTTCG CCGCCGTGCC GCTTGTGGCG CGAAGCCCGC
GCCAAGACAG GGCGGCCCGC GTGCTTCGCA CGCCGGGGCA CGCCCCAGCT TTCAGGGAGC
GCAGCCATGA GCGACCGCCG CGACGACGAT TTCCGCGTGC GCCCCAGCTC CCCGAAGAAC
CGGGGCAAGA GCCAGGGGCA GAGCTTCGTT TCCAAGGTGC TCAAGCAGGC GGGCAAGGCC
AGCAGCGGCA AGTCCACAGT GCGCCGTCCT GGCGCGGCGG GCGGCACCGG CCAACGGCCC
GGCTCGCGCC TCGGGCGCGG CCATACGGCG GCGCGCTTCG CGGGCGCGAA GCTGACGCCC
ATGTCCCGGC GCGTGACCAT CAAAACGCTG CTGGTGAATC ACCAGCGGGC CAGCCCGCAG
TCGCTCGCCA AGCACCTGCG CTACATCGAA CGTGATGGCG TGGGCCGCGA CGGCGAGCCG
GGCCAAGCCT ACGGGCCGCA GACCGACGCC GCCGACCTCG ACGCCTTCAA GGAACGCTGC
GCCGGCGACC GGCACCATTT TCGCTTCATC CTCTCGCCTG AGGATGGCGC GGATCTGGAA
GACCTGCGCA CCTACACGCG GCACCTCATG GGGCGCATGG AGGCCGACCT GGGCACGGGC
CTCGATTGGG TGGCCGTGAA CCACTGGAAC ACCGACAACC CGCACACGCA CATCATCGTG
CGCGGGCGCG ATGACACCGG CAAAGACCTC ATCATCGCGG GCGACTACAT CGCCGATGGC
TTCCGCCACC GCGCCGCCGA ACTGGCGACC GAATGGCTGG GGCCGCGCAC CGAGATGGAG
ATCCAGCAGA CCTTGCAGCG CGAGGTGGAG CAAGAGCGGT GGACGAGTCT GGATCGCACC
TTGAAGCGCG AGGTCGGCGA CGAGGGCCTG GTGCATGTCG AACGGCTCAA CGAACCCCGG
CTGCAACGCC AGCGCCTGCT GCTGATCGGC CGCCTGCAAC GCTTGCAGCG CCTGGGCCTG
GCCGACGAGA CGCAGCCGGG CACCTGGGCC GTCCATGCTG ATGCGGAAAA GACCTTGCGC
GCCTTGGGCG AGCGCGGCGA CATCATCCGA ACCATGCTGC GGGCCATGCG CGGCGAGCCG
CGCGAACTGG CGGTGTTCGA GCCGGGCGAC GACGGCTGTA CCCTCGTCGG CCGGGTGGCC
GCCAAGGGGC TGGCCGACGA GTTGTACGAC CGCGGCTATC TGGTCATCGA CGGCGTGGAC
GGCAAGGCCC ACTACGTCGG GCTCAACGCC GGTGACGAGC TGGCGAACTA TCCCACCGGA
GCCGTGGTGG AGGTACGCGG TTCCGCTGAG GTGCGGGCGG CCGACAGGAA CATTGCCGCG
CTGGCGAGCG ATGGCCTGTA CCACACCAAC CATCACCTGG CGATCGAGCA TGGCCGGGCC
AAGCCCGGCC GCGACCCGCA GGAAGTCGTC GCGGCCCACG TCCGCCGGCT GGAGGCCCTA
CGCCGGGTTG GCATCGTTGA GCGCGTGGCC GAAGGGCTAT GGAAGGTACC GGGCGACCTG
CCCGAGCAGG GCCGGCGCTA CGACGCGCAG CGCCTGGGCG GCGTGGCCGT GGAGCTGAAA
TCGCACCTGC CCATCGAGCG ACAGGCCCGC GTGATCGGGG CCACCTGGCT TGACCAGCAG
TTGATCGGCG GCGGCTCCGG CCTGGGCGAC CTGGGCTTTG GTGGCGAGGC CAAGCAGGCG
ATGCAGCAGC GCGCCGACTT CCTGGCCGAA CAGGGGCTGG CCGAGCGGCG CGGGCAGCGC
GTGATCCTGG CGCGCAACCT GCTGGGCACG CTGCGCAATC GGGAACTGGC GCAGACCGCC
AAGGACATTG CCGCCGAAAC CGGCCTGGAG CATTGGCCGG TGGCCGACGG CCGGCGCGTG
GCAGGCATCT ACCGGCGCTC CGTCATGCTC GCCAGCGGGC GCTATGCGAT GCTCGATGAC
GGCATAGGCT TCTCGCTGGT GCCGTGGCGG CCGGTAATCG AGCCGCGGCT GGGGCAGCGG
ATCGCCGCGA CGGTGCGCGG TGGCGGGGTC TCTTGGGAAG TTGGTCGGCA ACGCGGACCG
GCAATCGGCT GA
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| Protein sequence | MGVARHAAAS PPCRLWREAR AKTGRPACFA RRGTPQLSGS AAMSDRRDDD FRVRPSSPKN
RGKSQGQSFV SKVLKQAGKA SSGKSTVRRP GAAGGTGQRP GSRLGRGHTA ARFAGAKLTP
MSRRVTIKTL LVNHQRASPQ SLAKHLRYIE RDGVGRDGEP GQAYGPQTDA ADLDAFKERC
AGDRHHFRFI LSPEDGADLE DLRTYTRHLM GRMEADLGTG LDWVAVNHWN TDNPHTHIIV
RGRDDTGKDL IIAGDYIADG FRHRAAELAT EWLGPRTEME IQQTLQREVE QERWTSLDRT
LKREVGDEGL VHVERLNEPR LQRQRLLLIG RLQRLQRLGL ADETQPGTWA VHADAEKTLR
ALGERGDIIR TMLRAMRGEP RELAVFEPGD DGCTLVGRVA AKGLADELYD RGYLVIDGVD
GKAHYVGLNA GDELANYPTG AVVEVRGSAE VRAADRNIAA LASDGLYHTN HHLAIEHGRA
KPGRDPQEVV AAHVRRLEAL RRVGIVERVA EGLWKVPGDL PEQGRRYDAQ RLGGVAVELK
SHLPIERQAR VIGATWLDQQ LIGGGSGLGD LGFGGEAKQA MQQRADFLAE QGLAERRGQR
VILARNLLGT LRNRELAQTA KDIAAETGLE HWPVADGRRV AGIYRRSVML ASGRYAMLDD
GIGFSLVPWR PVIEPRLGQR IAATVRGGGV SWEVGRQRGP AIG
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