Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1864 |
Symbol | |
ID | 7315194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1985626 |
End bp | 1988274 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643616755 |
Product | putative diguanylate cyclase |
Protein accession | YP_002513932 |
Protein GI | 220935033 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.327534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTGCA ACCGCCTGTA CATCTCCCGG CCCAAGGAAT CGACACAGCG TGGCATCTCC CGAGCACCGC TCAGAACCCT CGCCAAGGCG CCGACCCGGC CCCATGTCCC TGTGTCACTC CGAGCCATGC CGTTGAAGAT CTCGCGCTGG CCCCTGCTGG CGGGTTGCCT TGCGGGCGGC CTGATGCTGC TCGTGCTTTT CAGCCTGCTG CAGGTCTGGA AGCAGCGGGT TCAGGACGAG ACCCGCGCCG AGCTGGTGGG GCAACTGGGC AATCTCCGGG CCCGGCTGGA ATCCGAGCTC AATGCGGTGA TCCACGTCAC CGACGGTCTG GTCACCTACA TCATGTTCAA CCCGGACCTG GGCGAGACCG AGTTCGACGC CATCGCCGCC ATGCTCATGG AACGCAGGCC GGGGCTGATC AGCCACTTCA CCGCTGCGCC CGACAACGTC ATCCGCTATC TCCATCCCCT GGAAGGCAAT CGTGCGGCCC TGGGCCTGGA CCTCATGAGC CACCCGGAGC AGTCCGGTTC GGTGCTGGAC ATGATGGAGC GCCGCTCGAC GGTGCTCGCC GGTCCCTGGG AGCTGGTGCA GGGTGGCCTG CGCCTGATCA TCCGCACGCC CATCTTCGTG CCTGCCCACG TGGCCGGGAC CGAGGACGAC CGCTACTGGG GACTGGTCTC CATTCCCGTG GACATGCAGC GCCTGTACGA GGCGGCCGGG CTGGGTTACT TCGAGCGCAG CATGGACATC GCCATCCGCG GGCGGGACGG CCTGGGCGCT CGGGGTGAGA CCTTCTACGG CGATCCGGCG CTGTTTCGCC GTGACAGCCT GCGCCAGACG GTGACCATGC TGGGGGGCGA GTGGGAACTG GCCGCCGAAC CCAGTGGCGG CTGGCCGGCG GTGACGCCCG TCGGCGGTCT CTGGGGTCTG ATCTGGCTGA TCACGCTGCT CACGGGCGCG CTGGCCTGGT ATCTGAGCCT CCAGGGACAG CGCCTGCGCC AGTCGGAGGT CAAGTACCGG GCGCTGATGG AGAACCTGAG CGACGGCGCG TGCATCGTCC AGGACGGCTG GCTGCGTTAT GTGAATCCCC GCTTCAGGGA CATCTTCGGC CATGACGAAG AATTACTGCT GTCTCATCAG CTGAGTGACT TCCTGGTCGC CGAGGACCGC GATCAGCTCG CCAGACTCAT GTCCAGGGTG ATCGCCGATC CTGCCCGCCC CGGACCGCTG GAGACGGAGC TTCGCATCCG CACCGGTGAT GCGGGGCACA GCTACGTGCG CATCAACCTG AGCGCCATGG CGTGGGAGGA CGGGCCGGCG ATACTGGCGA CGGTTTCCGA CATCGATGAC CGCAAGCGGC TGGCCAACCA GCTGCTCGAC AGCCATGAGC GGCTCAACGC CATCATCCGG GCACTGCCGG ACATCGGTTT CATCATCGAC GACCAGGGGC AGTACCGGGA TGTCTTCGGC GGCCTGGACA GCCAGCTGTA CCACCGGGGG CAGGCGCTGA TCGGCAAGCG CCTGCACGAG GTACTGCCGC TGGAGCTGGC GGACCGCTTC CTGTCGGTGG TGCACAAGGC CCTGGAGACC TCGAGCCTTC AGACCCTGGA ATATGCCCTG AGCGCCGAGC AGATCAGTAT CCCGCCCAAG GGAGGTCCCG ATGGAACCCT GTGGTTCGAA GGGCGTGTCA TGGCCATGGG GGCCAGGGTC TTCGACCGCC CCGCGGTTAT CTGGCTGGCC ATGAATGTCA CCGCGCGCAA GCGTCTGGAG GAATCCATGC GCCTCAATGC CCGGGTGTTC GAGGACAGCA ACGAGGGCAT CTTCATCACC GATGCGGGCA ACCGCATCAT CTCCGCCAAC ACGGCCTTCA CGCGCATCAC CGGCTATGAA GCCGCCGAGG TGATCGGTCG CAATCCGGGA CTGCTCAGCT CCGGCATGCA CGACGAGGCC TTTTATCAGT CCCTGTGGGA ACAGGTGCTG CTGCACGGGC GCTGGGAAGG GGAGATCTGG AACCGGCGCA AGGACGGTCG TGTGTATCCC CAGAACCTGT CCATCAGCGT GGTGCGCGAT GGTGAGGGAC GCATCAGCCA CCACATCGCC ATCTTCTCCG ACATCACCCG GCGCAAGGAG GCCGAGGCCC AGATCCGGCA CATGGCACTG CACGACAACC TCACCGGGCT GGCCAACCGC ACCCTGTTGC GGGATCGCCT GACACAGGCC ATCGAACAGG CGCGACGTGA CAGGAACAGC CTGGCGCTGC TGTTCATCGA TCTGGACGAT TTCAAGCCGG TCAATGATAC CCACGGCCAC GAGGCGGGGG ACCGGGTGCT CAAGGAAGTG GCTCAGCGTC TGCGGGCTGC GGTGCGCCGG GTGGACACCG TGGCGCGCAT GGGCGGGGAT GAGTTCGTGA TTCTGCTCCA GGCCCTGGAG CAGGAGGACA TGGCCATCCA GGTGGCCGAA AAGATCATCG ATTCACTGTC CAGGCCGATA CAACTCAACG GCCAGACATG CCTGCTGGGG GCCAGCGTCG GCATCGCCCT GCATCCCCGC CATGGCGAGG ACCACGACGG CCTGATGCGG GCCGCCGACC AGGCGCTTTA CCAGGCCAAG TCGGCAGGCA AGAACCGCTA CCAGGTCGCC GGGTACTGA
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Protein sequence | MSCNRLYISR PKESTQRGIS RAPLRTLAKA PTRPHVPVSL RAMPLKISRW PLLAGCLAGG LMLLVLFSLL QVWKQRVQDE TRAELVGQLG NLRARLESEL NAVIHVTDGL VTYIMFNPDL GETEFDAIAA MLMERRPGLI SHFTAAPDNV IRYLHPLEGN RAALGLDLMS HPEQSGSVLD MMERRSTVLA GPWELVQGGL RLIIRTPIFV PAHVAGTEDD RYWGLVSIPV DMQRLYEAAG LGYFERSMDI AIRGRDGLGA RGETFYGDPA LFRRDSLRQT VTMLGGEWEL AAEPSGGWPA VTPVGGLWGL IWLITLLTGA LAWYLSLQGQ RLRQSEVKYR ALMENLSDGA CIVQDGWLRY VNPRFRDIFG HDEELLLSHQ LSDFLVAEDR DQLARLMSRV IADPARPGPL ETELRIRTGD AGHSYVRINL SAMAWEDGPA ILATVSDIDD RKRLANQLLD SHERLNAIIR ALPDIGFIID DQGQYRDVFG GLDSQLYHRG QALIGKRLHE VLPLELADRF LSVVHKALET SSLQTLEYAL SAEQISIPPK GGPDGTLWFE GRVMAMGARV FDRPAVIWLA MNVTARKRLE ESMRLNARVF EDSNEGIFIT DAGNRIISAN TAFTRITGYE AAEVIGRNPG LLSSGMHDEA FYQSLWEQVL LHGRWEGEIW NRRKDGRVYP QNLSISVVRD GEGRISHHIA IFSDITRRKE AEAQIRHMAL HDNLTGLANR TLLRDRLTQA IEQARRDRNS LALLFIDLDD FKPVNDTHGH EAGDRVLKEV AQRLRAAVRR VDTVARMGGD EFVILLQALE QEDMAIQVAE KIIDSLSRPI QLNGQTCLLG ASVGIALHPR HGEDHDGLMR AADQALYQAK SAGKNRYQVA GY
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