Gene Tgr7_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1852 
Symbol 
ID7315182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp1971013 
End bp1972023 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID643616743 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_002513920 
Protein GI220935021 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.70474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTTT CCCTGCCCTG CAGTTCCGAT GCTTCCCCCG CGAATCCCTT GTCGCGACGC 
GTGAGCGTGG CGCCGATGAT GGACTGGACC GATCGGCACT GCCGCTATTT CCTGCGCCTG 
ATCAGCCGTC ACACGCTGCT GTACACGGAG ATGGTGACCA CCGGGGCCCT GTTGCACGGT 
GACCGGGAAC GCTTCCTGGC TTTTCATCCC GACGAGCATC CCCTGGCCCT GCAACTGGGC 
GGCAGCGAAC CGGGGGAACT GGCGGCCTGC GCGCGCATGG CCGAGGACCA TGGCTACGAC 
GAGGTGAACC TCAACGTGGG CTGCCCTTCG GACCGGGTGC AATCCGGGCG TTTCGGTGCC 
TGCCTGATGG CGGAGCCGCA ACTGGTCGCG GACTGCGTCG AGGCCATGCG CTCCGCCTGC 
GGTCTGCCGG TCACCGTGAA GACCCGCATC GGCATCGACG ACCGGGACAG CTACCCGGAG 
CTCACCGCGT TCATCGATAC CGTGCAGCGC AGTGGTTGCC GGACCTTCAT CATTCACGCC 
CGCAAGGCCT GGCTGCAGGG CCTGAGCCCC AGGGAAAACC GCGAGGTGCC ACCGCTTCGC 
CATGACTGGG TGTATCGACT CAAGCAGGAC TTCCCGGCGC TTGAGATCAT TCTCAACGGC 
GGCGTTAAGG ACCTGGACAC GGTGAGTGAT GCGCTGCGCC AGGTGGATGG CGTCATGCTG 
GGCCGGGAGG CGTATCACAA CCCCTACGTG CTGGCGCAGG TGGACGCGCG TTTCTACGGG 
GATGCCCATC CCGTTCCCAG CCGTCATCAG GTGGTGGAAC GCTTCCTGCC CTACGTGGAG 
GCGCGGCTTG CGCAAGGCGT GCCCTTGCAG GCCATGACCC GCCACATCCT CGGGTTGTTC 
CAGGGTGTGC CCGGCGCCCG CGCCTGGCGC AGGACCATCA GCGAGAACGC ACACCGCGCC 
GGTGCCGGTG TGGAGGTGAT CCAGGCAGCG GCGCAGCGCG TGCCCGGCTG A
 
Protein sequence
MSVSLPCSSD ASPANPLSRR VSVAPMMDWT DRHCRYFLRL ISRHTLLYTE MVTTGALLHG 
DRERFLAFHP DEHPLALQLG GSEPGELAAC ARMAEDHGYD EVNLNVGCPS DRVQSGRFGA 
CLMAEPQLVA DCVEAMRSAC GLPVTVKTRI GIDDRDSYPE LTAFIDTVQR SGCRTFIIHA 
RKAWLQGLSP RENREVPPLR HDWVYRLKQD FPALEIILNG GVKDLDTVSD ALRQVDGVML 
GREAYHNPYV LAQVDARFYG DAHPVPSRHQ VVERFLPYVE ARLAQGVPLQ AMTRHILGLF 
QGVPGARAWR RTISENAHRA GAGVEVIQAA AQRVPG