Gene Tgr7_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1842 
Symbol 
ID7315172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1954754 
End bp1955848 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content68% 
IMG OID643616733 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_002513910 
Protein GI220935011 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCC CCCGACACAT CATCGTGGGC ATGTCCGGGG GCGTGGACTC CTCCGTGGCC 
GCCCTGCTGC TGATCCAGGC CGGCTACCGG GTGGAAGGCC TGTTCATGAA GAACTGGGAG 
GAGGACGACG AGCCCGGCTA CTGCGCCGCC GCCGAGGACC TGGCCGATGC CAAGGCCGTC 
TGCGAAGTAC TCGAGATCCC CCTGCACAAG GTGAACTTCT CCGCCGACTA CTGGCACCGG 
GTGTTCAGTC ACTTTCTGGA CGAATACCAG GCCGGTCGCA CCCCCAACCC GGACATCCTG 
TGCAACAAGG AGATCAAGTT CCGGGCCTTC CTGGACTACG CCCGGCAACT GGGCGCCGAT 
GGCATCGCCA CCGGCCACTA CGCCCGCATC GGACGCGACG GGGAGTCCTA CACCCTGCTG 
GCCGGCCGGG ATGCCAACAA GGACCAGACC TACTTCCTCT ACACCCTGGG CCAGGAACAG 
CTCTCGAAGT CCCTGTTTCC CATCGGCGAA CTGGAGAAGC CCCGGGTCCG GGATCTGGCC 
CGGGCGCACG GCCTGCCGGT GTTCGCCAAG AAGGACAGCA CCGGCATCTG CTTCATCGGC 
GAGCGCCGTT TCAGGGATTT CCTGCAGACC TACCTGCCCG CCCGGCCCGG GGAGATCGTC 
GACCCGGAGG GCAACCGGCT GGGGGAACAC CAGGGGCTCA TGTACTACAC CCTGGGCCAG 
CGACAGGGCC TGGGCATCGG CGGCGTGCAC GACGCCGGGG AGGCCCCCTG GTACGTGGTG 
GACAAGGACA TGGCGCACAA CCGCCTGATC GTCGCCCAGG GCCATGACCA CCCCCTGATG 
CACCACCGGG GCCTGGAGGC CCAGGACCTG CACTGGGTGT CGGGCGAAGC CCCCCGGGAG 
GCCTTCAGCT GCCGGGCGCG CATCCGCCAT CGCCAGCCGC TGCAGGCCTG CCGGGTGGAG 
CCGCACGCCG ACGGCCGGGT GCGTGTGCTG TTCGACGAGG CCCAGCGGGC CATCGCACCG 
GGGCAGTCGG TGGTCTTCTA CCAGGAGGAT CGCTGCCTGG GCGGCGGCAT CATCGTGCGC 
CGATTCCATC CCTGA
 
Protein sequence
MSGPRHIIVG MSGGVDSSVA ALLLIQAGYR VEGLFMKNWE EDDEPGYCAA AEDLADAKAV 
CEVLEIPLHK VNFSADYWHR VFSHFLDEYQ AGRTPNPDIL CNKEIKFRAF LDYARQLGAD 
GIATGHYARI GRDGESYTLL AGRDANKDQT YFLYTLGQEQ LSKSLFPIGE LEKPRVRDLA 
RAHGLPVFAK KDSTGICFIG ERRFRDFLQT YLPARPGEIV DPEGNRLGEH QGLMYYTLGQ 
RQGLGIGGVH DAGEAPWYVV DKDMAHNRLI VAQGHDHPLM HHRGLEAQDL HWVSGEAPRE 
AFSCRARIRH RQPLQACRVE PHADGRVRVL FDEAQRAIAP GQSVVFYQED RCLGGGIIVR 
RFHP