| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1838 |
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| Symbol | |
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| ID | 7317648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1950108 |
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| End bp | 1952369 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616729 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
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| Protein accession | YP_002513906 |
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| Protein GI | 220935007 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.475798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACA AGGAACTCGA ATTCTCACTC AACCTGGCCT TCAAGGCCGC TCGCGAGAAA
CGTCACGAGT TCATGACCGT CGAGCACCTG CTGCTCGCCC TCACGGAAAA CCCCACCGCC
GCCTCGGTGC TGCGCGCCTG CGGCGTCAAC CTGGACAAGC TGCGCGGCGA GCTGGCGGAG
TTCGTGGACG CCAACACCCC GCGCCTGCCC CCCAATGACC CCCGCGACAC CCAGCCCACC
CTGGGCTTCC AGCGGGTGCT GCAGCGGGCG GTGTTCCACG TGCAGTCCTC CGGGCGCAAG
GAGGTCACCG GCGCCAACGT GCTGGTGGCC ATCTTCGGCG AGCAGGAATC CCACGCCGTG
TACCTGCTGT CCCAGCACGA CGTGGCCCGC CTGGACGTGG TGAACTACAT CTCCCACGGC
ATCTCCAAGG TGCCCGAGGA GCATCCCGAC GAGGAGGCCT CGAGCCAGCA GGAGGCGCCC
GCCGAGGGCG AGGAGAACCG CCAGAACCCG CTGGAGGCCT ACGCCACCAA CCTCAACGAA
CAGGCCCGCA AGGGCAAGAT CGACCCGCTC ATCGGCCGCG CCCACGAGCT GGAGCGCACG
GTGCAGATCC TGTGCCGCCG GCGCAAGAAC AATCCGCTGT ACGTGGGCGA GGCGGGCGTG
GGCAAGACCG CCATCGCCGA GGGCCTGGCC AAGAAGATCG TCGACGGGGA GGTGCCCGAG
GTCCTCAAGG ACGCGGTGAT CTACTCCCTG GACCTGGGTG CCCTGGTGGC GGGCACCAAG
TACCGGGGTG ATTTCGAGAA GCGCCTCAAG GGTGTATTGG CCCAGCTCAA GCGCCGCAAG
GGTTCGGTAC TGTTCATCGA CGAGATCCAT ACCATCATCG GTGCCGGTGC CGCCTCCGGC
GGCGTCATGG ACGCCTCCAA CCTGATCAAG CCCATGCTCG CCTCCGGCGA GTTGAAGTGC
ATCGGCTCCA CCACCTACCA GGAATACCGG GGCATCTTCG AGAAGGACCG GGCGCTGGCA
CGGCGCTTCC AGAAGATCGA CGTGAACGAG CCCACGGTGG ACGAGACCTA CGAGATCCTG
AAAGGGCTCA AGTCGCGCTT TGAGTCGCAC CACGACGTGC GCTACACCAA CAAGGCGCTC
CGGGCGGCGG CGGAGTTGGC CAGCCGCTAC ATCACCGACC GCCACCTGCC GGACAAGGCC
ATCGACGTGA TCGACGAGGC CGGCGCCAAC CGCCGCCTGC AGCCGGCCAG CACGCGCAAG
AAGACCATCT CCGTGCACGA CGTGGAGGCC ATCGTCGCCA AGATCGCGCG CATCCCGCCC
AAGAGCGTCT CCGCCTCCGA CATGGAGACC CTCAAGAACC TGGAGCGCAA CCTGAACATG
GTGGTGTTCG GCCAGGACGA GGCCATCTCC ACCCTGGCGG CCGCCATCAA GATGGCCCGC
TCGGGCCTGG GCGACGGGCA GAAGCCCATC GGTTCCTTCC TGTTCGCCGG TCCCACCGGC
GTGGGCAAGA CCGAGGTCAC CCGCCAGCTG GCCGACCTGC TGGGCATCGA ACTGGTGCGC
TTCGACATGT CTGAGTACAT GGAGCGGCAC ACGGTGTCGC GCCTGATCGG TGCGCCGCCC
GGCTACGTGG GTTATGACGA GGGCGGCCTG CTCACCGACG CGATCCTCAA GCATCCCCAC
GCGGTGCTGC TGCTGGACGA GGTGGAAAAG GCCCACCCCG ACGTGTTCAA CCTGCTGCTG
CAGGTGATGG ACCACGGCAC GCTTACCGAC ACCAACGGCC GCAAGGTGGA TTTCCGCAAC
GTGATCCTGG TGATGACCAG CAACGTGGGC GCGGATGTCT CCAGCCGCGC CACCATGGGT
TTCACCCGCC AGGATCATTC CAGCGACGCC ATGGAAGTGC TCAAGCGCAC CTTCACGCCC
GAGTTCCGCA ATCGCCTGGA CGCCATCATC CAGTTCCGCC CCCTGGCGCC GGAGACCATC
GCCAGCGTGG TGGACAAGTT CCTCACCCAG CTGCAGGCGC AGCTGGACGA GAAGAAGGTG
GTGCTGGACG TGGACGAGGA GGCCCGCACC TGGCTGGCCG AGCACGGCTA CGACCCGAAG
ATGGGCGCCC GGCCCATGGC ACGCGTGATC CAGGAGCACA TCAAGAAGCC GCTCGCCGAG
GAGATCCTGT TCGGCCGTCT GGCCGGCGGC GGCGAGGTGA GCGTCACCGT GCGCGACGGT
GCCCTGGCGC TGGAGTACGA AGAAGAGCCG GTGGCATCGT AA
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| Protein sequence | MLNKELEFSL NLAFKAAREK RHEFMTVEHL LLALTENPTA ASVLRACGVN LDKLRGELAE
FVDANTPRLP PNDPRDTQPT LGFQRVLQRA VFHVQSSGRK EVTGANVLVA IFGEQESHAV
YLLSQHDVAR LDVVNYISHG ISKVPEEHPD EEASSQQEAP AEGEENRQNP LEAYATNLNE
QARKGKIDPL IGRAHELERT VQILCRRRKN NPLYVGEAGV GKTAIAEGLA KKIVDGEVPE
VLKDAVIYSL DLGALVAGTK YRGDFEKRLK GVLAQLKRRK GSVLFIDEIH TIIGAGAASG
GVMDASNLIK PMLASGELKC IGSTTYQEYR GIFEKDRALA RRFQKIDVNE PTVDETYEIL
KGLKSRFESH HDVRYTNKAL RAAAELASRY ITDRHLPDKA IDVIDEAGAN RRLQPASTRK
KTISVHDVEA IVAKIARIPP KSVSASDMET LKNLERNLNM VVFGQDEAIS TLAAAIKMAR
SGLGDGQKPI GSFLFAGPTG VGKTEVTRQL ADLLGIELVR FDMSEYMERH TVSRLIGAPP
GYVGYDEGGL LTDAILKHPH AVLLLDEVEK AHPDVFNLLL QVMDHGTLTD TNGRKVDFRN
VILVMTSNVG ADVSSRATMG FTRQDHSSDA MEVLKRTFTP EFRNRLDAII QFRPLAPETI
ASVVDKFLTQ LQAQLDEKKV VLDVDEEART WLAEHGYDPK MGARPMARVI QEHIKKPLAE
EILFGRLAGG GEVSVTVRDG ALALEYEEEP VAS
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