| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1815 |
|---|
| Symbol | |
|---|
| ID | 7317625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1929885 |
|---|
| End bp | 1930544 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643616706 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_002513883 |
|---|
| Protein GI | 220934984 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.114997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGTT TTCTGTTCAT CATCGCGCTG TTACCCGTCG CCTATTACCT GCTGTGCGTC
GTGGCGCTGG CTTACCTGCG CTACCTGCCG CCACCCGTCA CAGGCGTGCA GACTCAACGG
GTCATCGAGC AGGTATGGAG TGGCGAACCT GTCATCCGCG ACTATCGCTG GCGCCCCGCT
TCCCAGATCT CCCCACACCT GCCCCGGGCC GTGGTGGCGG CCGAGGACGC CCGCTTCTTC
CTGCACCGGG GTTTCGACTG GGAGGAGTTG CACAAGGCCC GGGAAACGGC CAGGGACGAA
GGACAGTCCA TGCGCGGCGC CTCCACCCTC ACCCAGCAGC TGATCAAGAA CCTGTTCTTC
ACCACCCACC GAAATCCGGT GCGCAAGGTC TACGAGTGGG CGCTGACCCC GGTTGCTGAG
TTCATCCTGG GCAAGGACAG GATCCTGGAG CTGTACGTCA ACGTGGTGGA ATTCGGACCC
GGCATCTACG GTGCTGAGGC GGCCGCGCGC CACCACTACG GCATCACCGC AGCCGACCTG
TCCCGCCAGC AGGCCATGGG CCTCGCCGCG GTCCTCCCCG CGCCGCTGAC GCGCAGGCCC
CAGGCCATGG GCTGGTATAC GGAGATCATC GAGGAGCGCA TGCAGCAGCT GGGGTGGTAG
|
|---|
| Protein sequence | MRRFLFIIAL LPVAYYLLCV VALAYLRYLP PPVTGVQTQR VIEQVWSGEP VIRDYRWRPA
SQISPHLPRA VVAAEDARFF LHRGFDWEEL HKARETARDE GQSMRGASTL TQQLIKNLFF
TTHRNPVRKV YEWALTPVAE FILGKDRILE LYVNVVEFGP GIYGAEAAAR HHYGITAADL
SRQQAMGLAA VLPAPLTRRP QAMGWYTEII EERMQQLGW
|
|---|
| |