| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1795 |
|---|
| Symbol | |
|---|
| ID | 7317605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1913399 |
|---|
| End bp | 1914217 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643616687 |
|---|
| Product | CRISPR-associated RAMP protein, Cmr6 family |
|---|
| Protein accession | YP_002513864 |
|---|
| Protein GI | 220934965 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC CGCTTTATGA AGCCGCCCGC GGCGAACCGC TGGGCCTCCC TTCCGGCGGT
CACGCCGGCC TGTGGTTCGA GCGCTTCTTC GACCGTTTCG ATGCCGATTG GCAGCTTGGC
GATAGCACCG CGAAATCCGG ATGGATCGAT AGCATCGCCG GAAAAGATCA CGGCGACCGG
GAGGCCCTGC GCGCAGCCAC GGACCGTCAG TCCAGCTTGG CCAAGGATCT GGGTGGCCGC
AGCCAGGACT TCGAGGCCGA CTGGCGTTTC GTCACAGGCC TCGGTCTCGC CCACCCGGTG
GAAAACGGCT TCCTCTGGCA TCACACCCTC GGCGTGCCCT ATCTGCCCGG CGCCGCGGTC
AAGGGCCTGG TGCGTGCCTG GGTCTCCCAA TGGTGGGATG CACCGAGCGA GGAGGCGCGC
AAGCAGCGCC TGCTGGACTG GTTCGGTTCC GATGACACCG GCAACCCGAA AGGCTTCCGG
ACCGGCGGCT TCATCTTCTT CGATGCTTTG CCCATCAAGC CAGTCACGCT GGTGCGTGAT
GTCATGACGC CGCACGCGGG TAAGTGGTAC GAGCAGGGCG GCAACATCGA AGACCCTGCC
CGGCAACCCG AAGCGGTGCC CGCCGACTGG CACGACCCGA TCCCGGTCCC CTTCCTGGTG
GCGCAAAAGC CGCACCTGCG CTTCGCCATC GCCCCCCGGG ACCCGGCGCA CAAAGGGGAG
CTGGATCAGG TCATGGAGGC GCTCGGCGAT GCCTTGGACT GGCTTGGCGC GGGCGCCAAG
ACCGCCGCGG GCTATGGGCG GATGCGGGAC ATCGCATGA
|
|---|
| Protein sequence | MNRPLYEAAR GEPLGLPSGG HAGLWFERFF DRFDADWQLG DSTAKSGWID SIAGKDHGDR
EALRAATDRQ SSLAKDLGGR SQDFEADWRF VTGLGLAHPV ENGFLWHHTL GVPYLPGAAV
KGLVRAWVSQ WWDAPSEEAR KQRLLDWFGS DDTGNPKGFR TGGFIFFDAL PIKPVTLVRD
VMTPHAGKWY EQGGNIEDPA RQPEAVPADW HDPIPVPFLV AQKPHLRFAI APRDPAHKGE
LDQVMEALGD ALDWLGAGAK TAAGYGRMRD IA
|
|---|
| |