| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1785 |
|---|
| Symbol | |
|---|
| ID | 7317595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1902710 |
|---|
| End bp | 1903708 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643616677 |
|---|
| Product | transcriptional regulator-like protein |
|---|
| Protein accession | YP_002513854 |
|---|
| Protein GI | 220934955 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00220664 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA CACTGCTGCG TCAGTGGGCC ATGTTAAGCA TGATTCCCCG CCATCCACGC
AAGATCACTG CATCTCAGCT CAAGGAAAAG CTTGATGCCC AGGGTTTCAT GACCACCAAG
CGGACCATCG AGCGCGACCT GGTGGCCTTG TCTGGCGAAG GTTTTGCACT GGTGGTCGAT
GATCGCAGCC GTCCCCACGG CTGGCAGTGG GGGAGGGATG TGAAAATCCT CGACATCCCC
GGCATTGAGC CGCAGACGGC CCTGGCATTC AGGCTGGCCG AGCAGTTTCT GAAGCCACTT
ATGGCCCCGA GCACCCTCGC GGCACTCTCC CCCTACTTCC AGCAGGCCCG TCAAGTACTT
AAGGGTACAT CCGGTAATCT AAGCGCCTGG CCCAGTAAGG TCCGAATTTT GAGCCGCGGC
CAGTCCCTCA TCCCTCCAAA GGGTAATCAG GACATCCTCA TGATCGTCTA TGAGGCCTTG
TTCACGGACC GGCAGTTTCG CTGTCACTAC AGAAGACGAA CCGACCAGCA GGTCAAGGAA
TATGTGGTCA ACCCATTGGG TTTGGTGTTT CGCGATGGAA TGATCTATCT GGTCTGCACC
CTGTTTGAAT ACACAGATGT TCTTCAGCTT GCACTGCATC GCATGAGTCA AGCCGAGCCC
TTGGAGACCC CGGCCCAGCG TCCCGGAAAT TTCGACCTGG ATGCCTACCT CAAAGAGGGA
GGTCTGGATT TCAGGCTCGG CGGCACCCTA TCCCTTCGAC TCGATCTCAA AGCAGAAACC
GCGCAACACC TGGCCGAGAC CCCACTCTCG GAAGACCAGC AAATCAAAGG TCCTGACGCA
GAGGGCTGGG TTCAAATCAA GGCGACCGTA CCCGACACGG CCCAGCTTCG CTGGTGGATC
CTGGGACTCG GCGAACAGAT CAGAGTCCGA AAGCCCGTAG CGTTGAGAGA CGAAATCGCA
CACACACTCA AGGGAGCCGC CAGACTCTAC GAAGCCTGA
|
|---|
| Protein sequence | MSSTLLRQWA MLSMIPRHPR KITASQLKEK LDAQGFMTTK RTIERDLVAL SGEGFALVVD
DRSRPHGWQW GRDVKILDIP GIEPQTALAF RLAEQFLKPL MAPSTLAALS PYFQQARQVL
KGTSGNLSAW PSKVRILSRG QSLIPPKGNQ DILMIVYEAL FTDRQFRCHY RRRTDQQVKE
YVVNPLGLVF RDGMIYLVCT LFEYTDVLQL ALHRMSQAEP LETPAQRPGN FDLDAYLKEG
GLDFRLGGTL SLRLDLKAET AQHLAETPLS EDQQIKGPDA EGWVQIKATV PDTAQLRWWI
LGLGEQIRVR KPVALRDEIA HTLKGAARLY EA
|
|---|
| |