| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1773 |
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| Symbol | |
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| ID | 7317583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1881132 |
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| End bp | 1885859 |
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| Gene Length | 4728 bp |
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| Protein Length | 1575 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643616665 |
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| Product | hypothetical protein |
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| Protein accession | YP_002513842 |
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| Protein GI | 220934943 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.396183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCA AAGCGCAGCT GGAGCTTGCC CGTCAGGAAT TGCTGGATAT GGGGCTTCGG
GGGAACCCCA TGTTGCATGT ACCCAGGAAC AGCAAGTTCC TGGAGATCAT GGAGGGAGAC
ACGTCCTTCG TCTTCCAGAC ACTGACTGCC GAACGCAAGG CATTTGGTTT CCGGGGGCTG
GCCGAGGATG GGGAGGGGGA TGAACAGGAC GATCTCGAAG GCGAGATTCT GTCCGAAGCG
GGGGATGAAG CGGAAGCTGC CGTGGACTTC GCCTGGGAAG CCCTGAACAC CCGGCAACTG
CCAACCCGTC TCTCCGACGA TCGCCTGGAC GCCCGCCTGA TCAAGATGGA GAGCGAGGCC
CATACCCTGC TGCAGGAGCA GGGTATCGAC GTTCTGTACC TGGCCCTGGG TTTCCTGGAG
TGGTACGAGG ACCCAAATGC CCAGACGCCC CGCTTCGCGC CTCTGGTGCT CGTGCCCGTC
GAGCTCAGCC GAGAGTCCGT CAAGAGCCGG TACAGAGTTA CCTACACCGG GTCGGATTTA
GGCCCCAACT TGAATCTCGG CGCCAAACTG AAGGGCGAAT TCCGCCTGCA ACTGCCCGAT
TTCGAGGATG AGTTCGATTT CTCGGCCTAC CTTGAGGCGG TGGAGACGAC CATCGCCAAC
CAGGCGCGTT GGCGGGTGCA TCCGGATCGC ATGGTCCTTG GCTTCTTCTC CTTCGGCAAG
TTCCAGATGT ACGTGGATCT GGATCCAGGC AACTGGCCGG ATGAAAGCGC ATTGCTGGAG
AACATGCAGC TCAAGAAACT CTTCGAGAGC GGTTTTCAGA GCGATGCGGA CCTTCTTGAA
GGGGTCACCG GGCATGATGC CCTTCGGGAG CCGGAGACCC TGCATCTGGT GAAAGATGCA
GACTCAAGCC AGATGGAGGC GATTCTGGCT GTCATGGAGG GGGCCAACCT TGTCATCCAG
GGGCCTCCCG GGACGGGCAA ATCCCAGACC ATCACGAACC TGGTCGGGGA GGCCCTGGCC
CGGGGTAAGA CGGTGTTGTT TGTCGCCCAG AAGATGGCGG CGCTGGAGGT GGTGAAGACA
CGCCTGGACG AATGCCACCT GGGCGATTCG GTCCTGGAAC TGCACAGCCA CAAGAGCAAC
AAGAAGGCGG TGCTTGAGTC CCTTAAAGCG GTATTCGATC AGGGCAAGCC GACCTCGCCT
GACAGGGAGG CGGACTATCG GCGTCTCAGG GAAGTGCGTG AGTATCTCGA TGGCTATGTC
GAGGATGTGG GCGCGCCGGT ACTCAGTTCC GGTCTGAACT ACGTGCAGTG CCTGGGCCAC
ATGCTGCAGC TCAGGAAGGA TTCGCGCCTG GACGAACTGC CGCTGATCCC TTTCGACCTG
TTGCGTCACT GGGATCGCGA GGCCCTCGGC CGGGGTGAAC GCGCCATGGC GGGTGTGCGT
GACCACCTGC GAGAATTCGG ACCGAGTGAT GACAACCCGT TCAATCGCTC CAGGCGGGAT
TCCCTCTCTC CGAACGAGGA TCAGGTACTG ACGCGACTGG TGTCTGACTC GTCCACACGC
TTGCAGCAGC TCATGGACGA TGCCCATGGC CTGGCCCAGG CCATGAAAGT CCCGAGCCCC
ACCAGCTTCT CCGACATCAG CGTCCTCCAC CGGGCGGGAA AGCGGGCACT GGATGCGCCG
CATCTCCAGG GTATCAGGGT CAGTACCCAT GAATGGCAGG TACGTCGAGA CGATATTCGC
GAGGCCGTCT CCAGCGGCGC GGAAATGGCA CGCTTGAGGG CCGCATTGTC TGAGGTGTTC
ATCGACGCGG CCTTCGAGGC GGACCTGTTG CCGGTCCGCA TGGGGCTGGC CGGGCGCGCG
GATAAATGGT GGCGGGTGTT TTCCGGCGCC TATCGCAAGG CAAAGACGGA TCTGCGCGGA
CTGATGAAAG GGCCGCTGAC GGGGAAGCCC ACCCAGTGGC TGGCCTGGGT GGATGACCTC
CTGGCTTACC AGAGACACAG CAAGCGATTC CGGGAGCTTG AACCCGTTTG CCGTTCCCTG
TTTGGCGCGC AGTGGCAGGG TGTCCGCTCC GACTGGCCTG TGCTGGAGAG GCTGTCTTCC
TGGATCATCG AACTCTACGA GGCCATTGGG AAAGGTGACC TGCCCGAGGG GCTCGCCGAT
TTCCTTGAGG GCGATCCGGA CCTCAAGTCC TGGGAAGGAC ATGTGGAGGG TCTGGAAAAG
CAGTCATCCC AGCTTCAGTC CATGCTGGGT GATCTCAAGC TTTTGTTGCG TTGGGAGGTC
CAGGAGGGCG TCGAGTACAG CCTGGCGGAC TGGCGGAATT TGCTCCAAGG CTGGAGGGAC
ACCTCCAGAC TGTATGCCAT GACGCGTTTC AATCAACTGG AGAAGGAGAT CGAGGCGGCT
GGTCTGGGCA GCCTGATATC ACAGCTTCGC GACTGGCGGA AATCTCCGGA CGTGCTCGTG
GACTGGCTTC GGCACAGCTA TTTCTCCGGG TTGGTGGATA GCGCCTATGC GGACAAGGCA
CGTATCGGAC AGTTCGATCG TCTGGCCCAT GAGCGCATGA TCCGGGAATT TTCACAGTTG
GATCAGTCGG CGTTCAGTTT TGCCCAGGAA AAACTGGTCA GTCACCTCCA TGAGGCGCTG
CCATCGTTCC ATGCTGCCGG TGAAATGGAC ATTCTGCGAC GGGAATTCTC CAAAAAGCGT
CGTCATCTTC CGATTCGACG TCTTATGAGC GAAGCGGGTA GTGTCATCCA GCGCATCAAG
CCGGTGTTCA TGATGAGTCC CATGTCCGTG GCCACGTATC TGCCACAGGG CAAGATCCAT
TTCGACCTGG TGATTTTTGA CGAAGCCAGT CAGATCCCTG CTCCGGAGGC GCTGGGAGCG
ATCATCCGCG GCAACCAGGC TGTGGTGGTC GGTGACAGCA AGCAGATGCC GCCCACCAAT
TTCTTCAGCC GGGCAGTGGA GATCAGTGAC GAGGAGGCTG AACTAAGCGC GACCGCCGAC
GTGGAAAGCA TCCTCGGCCT GATGCTTGCG CAGGGCGTTC CGGAGCGCAT GCTGCGCTGG
CACTACAGAA GCCGCCATCA TTCGCTGATT GCGGTATCGA ACGATCAGTT CTACCAGAAT
CAATTGCTGA TCTTCCCGAG CCCCGGGAGC AACCCGCATG CGCGTGGTCT GCGTTTCCAT
CATCTGGCGC ATACACACTA TGACCGGGGC GGGTCCCGGG CAAATCTGGG AGAGGCACAA
GCGGTGGCGC GTGCTGTCAT GGACCATGCC ATGGCGACAC CGGAGTTGTC CCTGGGGGTC
GTGGCATTCA GTACCGCACA ACGCGAGGTC ATCCTGCTGG AAGTCGAACG CCTACGCAGA
GAACATCCGG AAACCGAGGC GTTCTTCCGT CACCATGACG GTGGAGACGA GTTTTTCATC
AAGAACCTTG AAAACGTACA GGGTGATGAG CGGGATGTGA TTTTCATCAG TGTCGGCTAT
GGCTTCACTG CAACGGGGCA GCTGGGGCAG AACTTCGGCC CTCTGAACGG GCAGGGGGGA
GAGCGCCGAC TGAACGTATT GATTACACGT TCAAGGCTTG CCATGGATGT GTTCGCGAAC
TTCCGGGCAG ACGACCTCAG AGTCGACGCG AATTCACCCT TCGGTGTCAG GGCGCTTAAG
GCCTTCCTGC ATTATGCGGA GACAGGGGAC CTGCCCAAAG GACAGGAGAC AGAGCGGGAG
CCGGATTCCC CGTTCGAACT CGAGGTCATG CGGGCTATTG AGAGGCTGGG GTACGAAGTC
CAGCCCCAGG TGGGAAGCAA GGGGTTCTAC ATAGACCTCG CCGTGCGTGA CCCGGCCCAA
CCGGGACGCT ACATACTGGC CGTGGAGTGT GATGGCGCCA GCTACCACAG CAGCGCTATC
GCCAGGGAAC GGGACAGGTT GCGACAGTCG GTGCTCGAAG GTCTGGGTTG GAGTTTTCAC
CGGATCTGGA GCACCGAGTG GTTCCGAAAT GCCCGTGGAG AGATCGATCG TCTCCGAGAA
TCTATCGAAT CCGCTCTTCG CAGTGCCGAG GCCTCGGTAA AGGGCGTAAA CGTAGTTAAA
AACCCGCATG ACGGAGCGAA TAGGACTCCA AAAGGACCGT TGATCGAGCG GGTGGCTGTG
CCCGCGCAGG GCAGCCAGGC CAGTATCCCG CCTTATCAGC CGGTGGATGT GAAGACGCTT
GGCCTTCCCA GGAACGTTGT AAATTTCCTG GATATTACCG AAGCCAAGCT ATCTTCGGCC
GTTCTGGCAG TTGTTGAGGG GGAGGGGCCT GTCCATACCC AGGTCCTGAC AAGCCGAATT
CTGAGCGCTG TGGGTCTGTC ACGAGCCGGT TCGAGGATCC AGCAAAGGAT TCTCGATATC
ATCAACAAGT TGGAACGCGG TAATCTGATC AGCTTCGATG GGGAGTTCGC ATATCCCAAG
GACGAATCTT CTGTTCCTGA GATCCGGGAC TGGTGTGCAT CCCCTGATGC GCCGAACAAG
TTCGAGTATG TCCCGGACAC CGAGCTGGTG TATGCCCTGT ATCACACCGT GAAGGACGCG
CATTCAATCC ATCCTGATGA CTGCATGGCC GCCGCGATTA ATTTGCTTGG ATTCAAGCGG
CTTACCGCAA GCGTGCGGGA ACGTCTGCAG GTGGTACTCG ACGAAATGAT CGAGACGCGC
GCCCTGAGGT CTGTGTCCGA TCGACTCCAG ATCGGGGAAG AGGGCTGA
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| Protein sequence | MSIKAQLELA RQELLDMGLR GNPMLHVPRN SKFLEIMEGD TSFVFQTLTA ERKAFGFRGL
AEDGEGDEQD DLEGEILSEA GDEAEAAVDF AWEALNTRQL PTRLSDDRLD ARLIKMESEA
HTLLQEQGID VLYLALGFLE WYEDPNAQTP RFAPLVLVPV ELSRESVKSR YRVTYTGSDL
GPNLNLGAKL KGEFRLQLPD FEDEFDFSAY LEAVETTIAN QARWRVHPDR MVLGFFSFGK
FQMYVDLDPG NWPDESALLE NMQLKKLFES GFQSDADLLE GVTGHDALRE PETLHLVKDA
DSSQMEAILA VMEGANLVIQ GPPGTGKSQT ITNLVGEALA RGKTVLFVAQ KMAALEVVKT
RLDECHLGDS VLELHSHKSN KKAVLESLKA VFDQGKPTSP DREADYRRLR EVREYLDGYV
EDVGAPVLSS GLNYVQCLGH MLQLRKDSRL DELPLIPFDL LRHWDREALG RGERAMAGVR
DHLREFGPSD DNPFNRSRRD SLSPNEDQVL TRLVSDSSTR LQQLMDDAHG LAQAMKVPSP
TSFSDISVLH RAGKRALDAP HLQGIRVSTH EWQVRRDDIR EAVSSGAEMA RLRAALSEVF
IDAAFEADLL PVRMGLAGRA DKWWRVFSGA YRKAKTDLRG LMKGPLTGKP TQWLAWVDDL
LAYQRHSKRF RELEPVCRSL FGAQWQGVRS DWPVLERLSS WIIELYEAIG KGDLPEGLAD
FLEGDPDLKS WEGHVEGLEK QSSQLQSMLG DLKLLLRWEV QEGVEYSLAD WRNLLQGWRD
TSRLYAMTRF NQLEKEIEAA GLGSLISQLR DWRKSPDVLV DWLRHSYFSG LVDSAYADKA
RIGQFDRLAH ERMIREFSQL DQSAFSFAQE KLVSHLHEAL PSFHAAGEMD ILRREFSKKR
RHLPIRRLMS EAGSVIQRIK PVFMMSPMSV ATYLPQGKIH FDLVIFDEAS QIPAPEALGA
IIRGNQAVVV GDSKQMPPTN FFSRAVEISD EEAELSATAD VESILGLMLA QGVPERMLRW
HYRSRHHSLI AVSNDQFYQN QLLIFPSPGS NPHARGLRFH HLAHTHYDRG GSRANLGEAQ
AVARAVMDHA MATPELSLGV VAFSTAQREV ILLEVERLRR EHPETEAFFR HHDGGDEFFI
KNLENVQGDE RDVIFISVGY GFTATGQLGQ NFGPLNGQGG ERRLNVLITR SRLAMDVFAN
FRADDLRVDA NSPFGVRALK AFLHYAETGD LPKGQETERE PDSPFELEVM RAIERLGYEV
QPQVGSKGFY IDLAVRDPAQ PGRYILAVEC DGASYHSSAI ARERDRLRQS VLEGLGWSFH
RIWSTEWFRN ARGEIDRLRE SIESALRSAE ASVKGVNVVK NPHDGANRTP KGPLIERVAV
PAQGSQASIP PYQPVDVKTL GLPRNVVNFL DITEAKLSSA VLAVVEGEGP VHTQVLTSRI
LSAVGLSRAG SRIQQRILDI INKLERGNLI SFDGEFAYPK DESSVPEIRD WCASPDAPNK
FEYVPDTELV YALYHTVKDA HSIHPDDCMA AAINLLGFKR LTASVRERLQ VVLDEMIETR
ALRSVSDRLQ IGEEG
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