| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1759 |
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| Symbol | |
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| ID | 7315781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1860887 |
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| End bp | 1862911 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616650 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002513828 |
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| Protein GI | 220934929 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC AATTTACCCT CAAGACCGGC TACACCCCGG CCGGTGACCA GCCCGCCGCC
ATCGAAAAGC TGGTGGAAGG CCTGGAAGAC GGCCTCGCCC ACCAGGTCCT GCTCGGCGTG
ACCGGCTCCG GCAAGACCTT CACCATCGCC AACGTCATCC AGCGCACCCA GCGGCCCACC
ATCATCCTGG CGCCCAACAA GACCCTGGCC GCGCAGCTGT ACGGGGAGAT GAAGGAGTTC
TTCCCGGACA ACGCGGTGGA GTACTTCGTC TCCTACTACG ACTACTACCA GCCGGAGGCC
TACGTGCCGG CCTCGGACAC CTTCATCGAG AAGGACGCCT CCATCAACGA TCACATCGAG
CAGATGCGCC TGTCCGCCAC CCGGGCCCTG CTGGAGCGGC GCGACGCCAT CATCGTGGCC
AGCGTCTCGG CCATCTACGG CCTGGGGGAC GTGAACGCCT ACATGCAGAT GGTGCTGCAC
CTGAAGCGCG GCGACCGGGT GGACCAGCGG GACATCCTGC GCCGCCTGGC GGAGCTGCAG
TACACCCGCA ACGACATGGA GCTGCGCCGG GGCACCTACC GGGTGCGCGG CGAGGTGATC
GATATCCACC CGGCGGAATC CGAGCGCGAG GCGGTGCGCA TCGAGCTGTT CGACGACGAG
ATCGAGCAGC TGTCCTATTT CGACCCGCTG ACCGGCGAGA TCCTCAAGCG CGTCGCCAGG
CTCACGGTCT ACCCCAAGAC CCACTACGTC ACCCCCCGGG AGACCATCCT GGGCGCCGTG
GAGCAGATCA AGGTGGAGCT GCGCGAGCGC CTGGAACAGC TGCGCTCGGT GGAGAAGCTG
GTGGAGGCCC AGCGCCTGGA GCAGCGCACC ATCTTCGACA TCGAGATGAT GCTGGAGGTG
GGCTACTGCT CGGGCATCGA GAACTACTCC CGCTACCTCT CCGGCCGCAA GCCCGGCGAG
CCCCCGCCGT GCTTCTTCGA CTACCTGCCC AAGGACGCCC TGCTGGTGGT GGACGAGAGC
CACGTGACCG TCCCCCAGCT GGGCGGCATG TACCGGGGCG ACCGCTCCCG CAAGGAGACC
CTGGTGGAAT ACGGCTTCCG CCTGCCCTCG GCCCTGGACA ACCGCCCCCT GCGCTTCGAG
GAATTCGAGG CCCTCTCGCC CCAGGCCATC TACGTCTCCG CCACCCCGGG GCCCTACGAA
CTGGAGCACG CGGGCCAGGT GGTGGAGCAG GTGGTGCGCC CCACCGGCCT GGTGGACCCG
GAGGTGGAGG TGCGCCCGGC CACCCACCAG GTGGACGACG TGCTCTCGGA GATCCGCGCC
CGGGTGGCGG TCAACCAGCG GGTGCTGATC ACCACCCTGA CCAAGCGCAT GGCCGAGGAC
CTGACCGAAT ACCTGCACGA GCACGACGTG CGTGTGCGCT ACCTGCACTC GGACATCGAT
ACCGTGGAGC GGGTTGAGAT CATCCGCGAC CTGCGCCTGG GGGAGTTCGA CGTGCTGGTG
GGCATCAACC TGCTGCGCGA GGGCCTGGAC ATGCCCGAGG TCTCCCTGGT GGCCATCCTG
GACGCGGACA AGGAGGGCTT CCTGCGTTCC GACCGTTCCC TGATCCAGAC CATCGGACGC
GCCGCCCGCA ACGTGCACGG CAAGGCCATC CTGTATGCCG ACCGGATCAC CGGCTCCATG
GCCCGGGCCA TGGAGGAGAC CGAGCGACGC CGGGAGAAGC AGATCGCCCA CAACCTGGAG
CACGGCATCA CGCCCAGGAG CGTGGAAAAA CGCATCGCCG ACATCATGGA AGGCGCCTAC
GCGGGTGGCT CGATGGCCTC GCCAAAGCGC TTCGCTAAGG TGGCCGAGGA GGAGATTGCC
TACGGCCTGC CGCCGGAGAA GGCGGTCAAG GAGATCGCCC GGCTGGAAAG CCAGATGTAC
GAGCATGCCC GCAACCTGGA GTTCGAGGAG GCCGCGCTCC TGCGCGACCG CATCGAGCAC
CTGCGCAAGG GCTCCCTGGG CATGCCGGAG ACCGCGAACG GATGA
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| Protein sequence | MTQQFTLKTG YTPAGDQPAA IEKLVEGLED GLAHQVLLGV TGSGKTFTIA NVIQRTQRPT
IILAPNKTLA AQLYGEMKEF FPDNAVEYFV SYYDYYQPEA YVPASDTFIE KDASINDHIE
QMRLSATRAL LERRDAIIVA SVSAIYGLGD VNAYMQMVLH LKRGDRVDQR DILRRLAELQ
YTRNDMELRR GTYRVRGEVI DIHPAESERE AVRIELFDDE IEQLSYFDPL TGEILKRVAR
LTVYPKTHYV TPRETILGAV EQIKVELRER LEQLRSVEKL VEAQRLEQRT IFDIEMMLEV
GYCSGIENYS RYLSGRKPGE PPPCFFDYLP KDALLVVDES HVTVPQLGGM YRGDRSRKET
LVEYGFRLPS ALDNRPLRFE EFEALSPQAI YVSATPGPYE LEHAGQVVEQ VVRPTGLVDP
EVEVRPATHQ VDDVLSEIRA RVAVNQRVLI TTLTKRMAED LTEYLHEHDV RVRYLHSDID
TVERVEIIRD LRLGEFDVLV GINLLREGLD MPEVSLVAIL DADKEGFLRS DRSLIQTIGR
AARNVHGKAI LYADRITGSM ARAMEETERR REKQIAHNLE HGITPRSVEK RIADIMEGAY
AGGSMASPKR FAKVAEEEIA YGLPPEKAVK EIARLESQMY EHARNLEFEE AALLRDRIEH
LRKGSLGMPE TANG
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