| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1754 |
|---|
| Symbol | |
|---|
| ID | 7315776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1855366 |
|---|
| End bp | 1856409 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643616645 |
|---|
| Product | beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_002513823 |
|---|
| Protein GI | 220934924 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGG GCCCCGTCAT GCTGGACCTG GAGGGCACCG CGCTCACCGA GACGGAACGC
CGCCTGCTGA CCCATCCCCG GGCCGGTGGG GTGATCCTGT TCACCCGCAA CTTCGAGTCC
CTGGGACAAC TCACGGAACT GCTGCGCGAG ATCCATGCCC TGCGCACGCC TCGGCTGCTG
GTGGCCGTGG ACCACGAGGG TGGACGGGTG CAGCGCTTTC GCGAGGGCTT CACGCGCCTG
CCAGCCGCAG CCCGCTTCGG CGAGCAGTAC GACCGCAACC ATGCCCGTGG CAGGGAACTG
GCGCGCATGG CCGGCTGGCT GATGGCCGCC GAGCTGCGCG CCGTGGGCGT GGATTTCAGC
TTTGCCCCGG TGCTGGACCT GGCCCACGGG GTCAGCGGCG TGATCGGCGA CCGGGCCTTC
CACCGGAATC CCGAGGTGGT GGCAGACCTG GCGCATCACT ATATGAGCGG CATGCAGCAC
GCGGGCATGG CCGCCGTGGG CAAGCACTTT CCAGGGCATG GCGGGGTGCG CGAGGACTCC
CATCTCGCCC TGCCGGTGGA CCGGCGCACA CCGGCGGATC TCTACACGGA CATCCTGCCG
TTTGAACGCA TGGTGCGTTT CGGCCTGGCG GGGATCATGC CCGCCCACGT GGTCTACGAA
CGCTGCGACC CCCTGCCTGC GGGCTTTTCC AGCTACTGGC TGCGCGGCGA ACTGCGCGAC
CGGCTGGGCT TTGAAGGCGT GATCTTCAGC GACGACCTGA GCATGGCCGG CGCCGAGTGC
ATGGGAGATT ACCCGGACCG GGCCCGCGCG GCACTCAAGG CCGGCTGCGA CATGGTGCTG
GTCTGCAACC ATCCGGAACA GGCTGCCCGG GTGCTGGACG CCCTGGACGA CGAACCAGAC
CCGGTCTCCA TCGCCCGGCT GGCCCGCATG CACGGACGCA AGGGCATGAC CTGGGGGGAG
CTGACGGACT CCGATGAGTG GCAGAAGGCC AGGGCGGTGA TCAACGCCCT GGACGATTCG
CCCCTGATGG AACTGGATGT CTGA
|
|---|
| Protein sequence | MSLGPVMLDL EGTALTETER RLLTHPRAGG VILFTRNFES LGQLTELLRE IHALRTPRLL
VAVDHEGGRV QRFREGFTRL PAAARFGEQY DRNHARGREL ARMAGWLMAA ELRAVGVDFS
FAPVLDLAHG VSGVIGDRAF HRNPEVVADL AHHYMSGMQH AGMAAVGKHF PGHGGVREDS
HLALPVDRRT PADLYTDILP FERMVRFGLA GIMPAHVVYE RCDPLPAGFS SYWLRGELRD
RLGFEGVIFS DDLSMAGAEC MGDYPDRARA ALKAGCDMVL VCNHPEQAAR VLDALDDEPD
PVSIARLARM HGRKGMTWGE LTDSDEWQKA RAVINALDDS PLMELDV
|
|---|
| |