| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1739 |
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| Symbol | |
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| ID | 7315761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1840528 |
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| End bp | 1841904 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643616630 |
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| Product | Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains-like protein |
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| Protein accession | YP_002513808 |
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| Protein GI | 220934909 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAC GTTCCCTGCT GCCGATGATG GAAGCGGTGG TGGCCTTTAT CGACGAGGGT
GTCGTCATTG CCGAACGCAG TGGAGAGGTG ATCTACCAGA ATCCGGCGTC ATTCGAATTG
CTCGGTATCG AGGGCGGTGT GCCGCTGGAT CATCTGAAAA ACATCCCCGG CATCAGCTTC
AACAAGGAGA TGCTGCGCGC CGCCATCGAG GCCGGTGAAG TGGATGCGGC GGGCAGACCC
AGCGGGAACT TCCTCAGTTT CGAGATCCTG CGTGAACGCA ACGGGGGCTT CACGTCTCTG
CGCTTTCACA GCGGGCTGGT GGACCTGCCC AGTGCGAAGA CGACACTTCG CCTGGTGCTG
ATCAGCGATA TCACCGAGCG ACGCCGCAAG GAGGTGTCCG GGAGCATCCA GGACGGCGGC
ATGGTCACCA ATGACTCGCG GATGCGGGAT GTCGTGACCC GAATCCAGCA GGTGGCGCCC
ACCACCGCGT CACTGCTGAT CCTGGGTGAG TCCGGTACCG GCAAGACCAG GCTCGCCCGC
ATGGTGCATG CCCTCAGTGA AAGGGCCAGG GAACCCTTTG TCGAGGTCAA TTGCGCCGCC
ATCCCGGAAT CACTGATCGA GTCCGAACTG TTCGGGCACG TCAAAGGCGC CTTCACCGGA
GCGCTCCATG ACCGGGCAGG GCGCTTCCAG TCCGCACACA AGGGCACCCT GTTCCTGGAT
GAGGTCACGG AGATTCCCCT GAACATCCAG GCGAAGCTGC TGCGCGCCCT GCAGGACCAG
GAATTCGAGA TGGTTGGATC CGACAAGACC ATCAAGGTGA ACGTGCGTGT GATAGCGGCC
TCGAACCGCA ACCCCAAAGA CCTGCTCGAA TCCGGCAGCC TGCGCGCCGA CCTTTATTAC
CGTCTTGCCG TGATCCCGTT GGAAGTGCCG CCACTGCGTG AACGCACCGG CGACATTCCC
CACCTGATCG AACACTATCG CCAGGTGCTG GAAAACCGTG GCTATGCCAG CGATTTTCGC
ATCAGCCAAA AGGCCATGGG GGCGTTGCTG GACTACCCCT GGCCAGGCAA TGTTCGGGAA
CTGGAGAACG CCATTGAACA TGGCGTGATC TGCGCCGAGG ACGGCGTGAT CCAGGTGGAC
AGCCTGCCCA GTGACATCCA GCGACACTAT GCGCACGCCA CTGGACAAAA CGCCGGCGCG
AACGCGACGT TACCCGCTGA CGTGGAATCC GACGTGGTGG ATATCAGCAG TGAGAAAGAC
CGCATCCTGG AGGCGCTCGA CGAGGCCGGA GGCAACAGGG CCCTGGCAGC CAGCCTGCTG
GAGATCGACC GAACCACCCT GTGGCGCAGG ATGGTCAAGT ATGGCATCAC GAATTAA
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| Protein sequence | MDIRSLLPMM EAVVAFIDEG VVIAERSGEV IYQNPASFEL LGIEGGVPLD HLKNIPGISF
NKEMLRAAIE AGEVDAAGRP SGNFLSFEIL RERNGGFTSL RFHSGLVDLP SAKTTLRLVL
ISDITERRRK EVSGSIQDGG MVTNDSRMRD VVTRIQQVAP TTASLLILGE SGTGKTRLAR
MVHALSERAR EPFVEVNCAA IPESLIESEL FGHVKGAFTG ALHDRAGRFQ SAHKGTLFLD
EVTEIPLNIQ AKLLRALQDQ EFEMVGSDKT IKVNVRVIAA SNRNPKDLLE SGSLRADLYY
RLAVIPLEVP PLRERTGDIP HLIEHYRQVL ENRGYASDFR ISQKAMGALL DYPWPGNVRE
LENAIEHGVI CAEDGVIQVD SLPSDIQRHY AHATGQNAGA NATLPADVES DVVDISSEKD
RILEALDEAG GNRALAASLL EIDRTTLWRR MVKYGITN
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