| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1733 |
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| Symbol | |
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| ID | 7315755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1834715 |
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| End bp | 1836394 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643616624 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002513802 |
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| Protein GI | 220934903 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAC GCCTGATTCC CCTGCTCTGT GCGCTGTGCC TCCCTGCCCT GTCCATGGCG
CAGGACACCG GCAGCGCGTC GCGTCCCGGT GATGCCGGGC GTAGCCAGAT CGAGACCCGC
GCCGTGGATA TCAACGCACC GCGGGTGGAC GATCAGGAAC TGCGCCTGGA CAAGGGCAGT
CCGGTGGCCT CCGATGGCGT GCGTGGACAG GGGCTGAGGC TGGATATCCC CGAGGGCTGG
TCGCCAGTGA CCGGCGATAG CGAGACCCTG TCGCTGTCCG TGGAGAACGC GGTGTTCCTG
GCCCTGCGTC ACAACCGGGC GCTGTCCATC CAGCAGCTGC GGCCGCTGAT CACCGGCACC
TTCGAGGCCA CCGAGCGCGC GGTGTTCGAC CCGGTGCTGT TTGCCGAGGC CAGCCATTCG
GGTGATCGGG TGGTCAGGCA GCTGGTGGAG GTCGAGGAAG TCGATCTCGT GACCTCGGAT
CGGGATCTTC TCGAGGCCGG CGTGCGTCAG CAGTTTCCCA CCGGTACCCA GGTGGAGCTC
AGTCTGAGAA GCGTGCGCAG CGGCTCCAGC CGACTCGATG ACGACCAGTT CAGCGCCCGT
GCCGGCATCA CCCTGACCCA GGCCCTGCTG CGCGGTGCAC GCATGGAATC CAACCTGGCC
CGTCTGCGCC AGGCCGAGCT GGATACCCTG GCCTCGGAGT ACGAGCTGCG CGGATTCGCC
GAGGCCCTGG TGGCGGACGT GGAGCGCGCC TACTGGGACT TCGTACTGGC GAGCCGCCGC
ACGGAGATCT TCGCCGAGGC CCTGGCCGTG GCCGAGCAGC AGCTCTCCGA TACCCGCAGC
CGCATCCGCG TCGGTCAGCG CGCCGAGACC GAGGAGACCG CGGCGCTTGC CGAGGTGGCC
CTGCGACGCC AGGGACTCAT CAATGCCCGG GCCCAGCAGG CCACCACGCG CATGCGCCTG
TTGCAGCTGG TCAACCCCGC CGGTGCCAGT TGGGATACGC GCATCGAACT GGAGCAGCGT
CCGGAGATCT CCACCAGCGT GCTGGATCCG GTGGACCTGC ACGTGCGGCT GGCCCGGCAG
TTGCGGCCGG ATCTCAATGA GTCCCGCATC CGCGCCCGGC GCGGCGAACT GGAGGTCATC
CGCACGCGAC AGGGTCTGTT GCCGCGTCTG GATCTGTTCA TCACCCTGGG CGAGTCCGGC
TATGCCGATG CCTTCGGCCG TGCCTGGCGG GATCTGGATG GCCCCGGCTA TGACTACAGT
CTGGGCCTGC GTTTCGAGAC GCCTTTCGGC AACAGGGCCG CCCAGGCGGA GACGCGCAGG
GCCCGCCTGA GTCGCCAGCA GGCCCTGGAG GCCGTGGCCA ACCTGGCGCA GCTCGCCGCA
CTGGACGTGC AGACGGCCTG GCTCGAGGCG GAACGCACCC GTGAACAGAT CAATGCCACG
AAGGTGACCC GCGAGTTGCA GGAAGAGGTA TTGCGCGCGG AGCAGGCGCG TTTCGCCGTG
GGCACAGGAA CCGCCCTGGC GCTGGCCCAG GCGCAGCGGG ATCTGCTGGA AAGCCAGCTG
GAGGAAGTGG AGGCGTTGAT CCGCCATCGC CAGGCCCTCA CCGACCTGTA TCGTCAGAGC
GGAACCCTGC TGATCCGCAG GGGCATCAAT GCGGCGGGTG ATGAGGAAGT GGTTTTGTAG
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| Protein sequence | MHQRLIPLLC ALCLPALSMA QDTGSASRPG DAGRSQIETR AVDINAPRVD DQELRLDKGS
PVASDGVRGQ GLRLDIPEGW SPVTGDSETL SLSVENAVFL ALRHNRALSI QQLRPLITGT
FEATERAVFD PVLFAEASHS GDRVVRQLVE VEEVDLVTSD RDLLEAGVRQ QFPTGTQVEL
SLRSVRSGSS RLDDDQFSAR AGITLTQALL RGARMESNLA RLRQAELDTL ASEYELRGFA
EALVADVERA YWDFVLASRR TEIFAEALAV AEQQLSDTRS RIRVGQRAET EETAALAEVA
LRRQGLINAR AQQATTRMRL LQLVNPAGAS WDTRIELEQR PEISTSVLDP VDLHVRLARQ
LRPDLNESRI RARRGELEVI RTRQGLLPRL DLFITLGESG YADAFGRAWR DLDGPGYDYS
LGLRFETPFG NRAAQAETRR ARLSRQQALE AVANLAQLAA LDVQTAWLEA ERTREQINAT
KVTRELQEEV LRAEQARFAV GTGTALALAQ AQRDLLESQL EEVEALIRHR QALTDLYRQS
GTLLIRRGIN AAGDEEVVL
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