Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1726 |
Symbol | |
ID | 7315748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1821913 |
End bp | 1824249 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643616617 |
Product | putative diguanylate cyclase |
Protein accession | YP_002513795 |
Protein GI | 220934896 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.597451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGCAA TACAGCGGGG CCTGTTATTG ATGATGGTGC TGTTCCTGAC CACATCTGGC TCGCTGGCCT CAGCTGAGAC CGTGCGTATC CAGCTCAAGT GGTTTCATCA GTTTCAGTTT GCTGGCTATT ACGCCGCCCT GGAAAAAGGC TATTTCGCCG AGGAAGGCCT GCAGGTCGAG CTGATCGAAC GGGACATCAG CCGCAACAAC ATCCAGCAGG TTCTTGCGGG CGAAGCCGAG TACGGCATCG CCGATTCCGC CATCCTGCTC TATCAGCAAC AGGGCGCCCC GCTGCGTATC GTGGCCCCGA TCTTCCAACA CTCGCCCAAT GTGATCGTGA CCCGGGCCGA TTCGGGGATC CTCTCACCAC AGGATCTGGT CGGCCGGCGG GTGCGCCTCT ACAACAACGA GACCGACGGT TTCCCGATCA TGGCGATGCT CGCCGAACAA GGGGTATTGG CCCAGGGAGT GATTCGCCAA CCCTACAGTC CGGATCTCGA GGCGCTGATT CGTAACGAAA CGGATGCCAT TTTCGCCTAC AGCAGCAATG AACCCTTCCA GCTGCGTGAG AAAGGTCTGG ACGTGCGCAT CATCCATCCC GCGCATTACG GCATCGATAT GTACGGGGAC ATGCTGTTCA GCTCGGAGTC CGAGGCAATA CAGCATCCAG AGCGTTTGCA GGCGATGCGT CGGGCGGTAT TGCGCGGGTG GGAGTATGCC CTGGACAACA AGCTGGAGAT CGCCCAACTG ATACGGGAGA AATACAGCCA GCGAAAATCC CTGGCCGCCC TGATGTTTGA AGCCCATGCC ATCGAGCAGG CGGTAGATCG TTTCGCCGTG CCGCTCGGCA CACTCGACAG TGGACGACTC CAGTACATCG CCGGCATCTA CCAGCGTCAC GGCCTCCTGG ATGATCATTT TCGCGTCGAT CGACGCATGT ATTTCGATCG CGCTGCCGGC GAAGGCAGCA ACCTCACAGA CGAAGAAAGT CTCTTCCTGG ATCAGAACGA CGTGATTCGT GTAGCGGTCG ACCCAAGCTG GTATCCCATG GAATTCGTGG ATGAATCCGG TCAGCACGGA GGGATCGCCG CGGATTACCT GGCATTGCTG TCCCAGCGCC TGGGAATCAG GTTTGAAATC GCGCAAGGGG TCTCGTGGGC CGATGCCGTG ACGATGGTGC GTGAACGCGA ACTGGACATG TTCGCCATGG CTGCGCGAAC CCCGGAACGT GATCATTTTG CCTTGTTCAC CCAGCCCTAC ATCCGCTCAC CCATGGTCAT CGTCACCGAC ATGGGAGTGG ATTACATTGA CAGCCCCGTG CGACTGCATG GCAAAAAGGT GGCCGTGGTC AGGGGTTACG CCTCGCACGA ATGGCTGGCA AGCAATCAAC CGGAGATCCC TTTACGCTTG GTGGACACCA CGGTCGAGGG ACTGGAGCGC GTCGCCACGG GCGAGGTTTA TGCCCTTGTC GATAACCTCG CTTCAGTGAC TTTTCTGATC AAGCAACGTG GCTTGTCCAA CCTCAAGGTA TCGGGCCAGT TGCCGCTGGG CTTCGATCTG GCCATGGGCG TGCGCAGCGA CTGGCCTGAG TTGCGCACCA TCCTGCAAAA GGGTCTGGAT GCGATCAGCC AGGAGGAACG GGACGCCATC TACGACAAGT GGGTGCGTCT GGAGGTGGAA ACCCGCCCCG ACCTGAGCAA GGTAGCGCCC TACTTCATCG CCCTGCTGCT GATACTCGCC CTGGTCAGCC TGGATGCCTG GCGAGTGCGT CGCTTGCACC GACGCTTGCA AGAGGCCAAT CGACAACTAC ATCTGGCCGA GCAGCGCCTG ATCGAGCAAA ACCATCAACT GGAACTGCTA TCGATTACCG ACAAACTGAC CGGGGCCTAC AACCGTCTCA AACTCGATGA AGTCCTGCAA CAGCAGCACG CCCTGGCCGA GCGCTATAAA CGACCAGTTT CGGTGGTGAT GTTTGACCTG GATGATTTCA AACGTGTCAA CGACACTCAC GGACACCATG CCGGCGATCT GATCTTGCGG CGCTTTACCG AACTTGTGTT GAGCCTTGCA CGCAAAAGCG ATGTGTTCGG GCGCTGGGGT GGCGAGGAAT TCTTACTGAT CTGTCCGGAA ACCACCGCCT TGGATGCGGC CGACCTGGCC AACAGGGTGC GTGTGCAACT GGCCGAAATC GTCTTTGAAG AAGTCGGCAC CCAGACTGTC AGTTCTGGTA TCGCAGAGTT ACGGCCGTCG CAATCTGTGA ATGACTGGAT CAGCCATGCG GACAAGCGTC TGTATCAGGC CAAGCAGCAG GGGCGTAACC GGGTTGTCAG TAACTGA
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Protein sequence | MRAIQRGLLL MMVLFLTTSG SLASAETVRI QLKWFHQFQF AGYYAALEKG YFAEEGLQVE LIERDISRNN IQQVLAGEAE YGIADSAILL YQQQGAPLRI VAPIFQHSPN VIVTRADSGI LSPQDLVGRR VRLYNNETDG FPIMAMLAEQ GVLAQGVIRQ PYSPDLEALI RNETDAIFAY SSNEPFQLRE KGLDVRIIHP AHYGIDMYGD MLFSSESEAI QHPERLQAMR RAVLRGWEYA LDNKLEIAQL IREKYSQRKS LAALMFEAHA IEQAVDRFAV PLGTLDSGRL QYIAGIYQRH GLLDDHFRVD RRMYFDRAAG EGSNLTDEES LFLDQNDVIR VAVDPSWYPM EFVDESGQHG GIAADYLALL SQRLGIRFEI AQGVSWADAV TMVRERELDM FAMAARTPER DHFALFTQPY IRSPMVIVTD MGVDYIDSPV RLHGKKVAVV RGYASHEWLA SNQPEIPLRL VDTTVEGLER VATGEVYALV DNLASVTFLI KQRGLSNLKV SGQLPLGFDL AMGVRSDWPE LRTILQKGLD AISQEERDAI YDKWVRLEVE TRPDLSKVAP YFIALLLILA LVSLDAWRVR RLHRRLQEAN RQLHLAEQRL IEQNHQLELL SITDKLTGAY NRLKLDEVLQ QQHALAERYK RPVSVVMFDL DDFKRVNDTH GHHAGDLILR RFTELVLSLA RKSDVFGRWG GEEFLLICPE TTALDAADLA NRVRVQLAEI VFEEVGTQTV SSGIAELRPS QSVNDWISHA DKRLYQAKQQ GRNRVVSN
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