Gene Tgr7_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1680 
Symbol 
ID7315702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1780770 
End bp1781393 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID643616572 
ProductThiJ/PfpI domain protein 
Protein accessionYP_002513750 
Protein GI220934851 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.883371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGC ACGTCGGCAT CCTGATCTTC GAAAACGTGG AGGTGCTGGA CTTCACCGGC 
CCCTACGAGG TGTTCGTCAC CACGCGCCTG GATGAGACGC GTCGGCGCGA GACCGAGTCC 
CCGTATCGGG TGAGCCTGCT GGCGGCCACC GCTGAGCCGG TCACCTGTTC CGGCGGCATG 
CGCGTGCTGC CCACGTACAC ACTGAACGAT GCACCCGCCC TGGACATCCT GGTGGTGCCG 
GGAGGCTGGG GCGTGCGCGC CTTGCTGGAG GATGCAGCCC TGCAGGCCTG GCTCAGGGAC 
AGGGCAGGGC AGGTGAGCAC GCTTGCCTCG GTGTGCACCG GCTCCCTGCT GTTGGCCTCA 
GCCGGCCTAC TGGACGGACG GGACGCCACC ACCCACTGGC GTTCCCTGCC CTTCATGAAA 
GAACATTTCC CACGGGTCCG CGTGCACGAG GACCTGCACG TGGTGCAGGA TGGTGACCTC 
ATCAGTTCCG CCGGCATCTC CGCGGGCATG GACCTGGCAC TGCACCTGGT GGCGCGGGAT 
CATGGCGTGG AGGTGGCCGC CAACGCCGCG CGCAACATGG AATACCCCTG GCCCACGGAC 
AACACGCGAA GGGTGACACT CTGA
 
Protein sequence
MQKHVGILIF ENVEVLDFTG PYEVFVTTRL DETRRRETES PYRVSLLAAT AEPVTCSGGM 
RVLPTYTLND APALDILVVP GGWGVRALLE DAALQAWLRD RAGQVSTLAS VCTGSLLLAS 
AGLLDGRDAT THWRSLPFMK EHFPRVRVHE DLHVVQDGDL ISSAGISAGM DLALHLVARD 
HGVEVAANAA RNMEYPWPTD NTRRVTL