| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1678 |
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| Symbol | |
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| ID | 7316930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1778765 |
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| End bp | 1780108 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616570 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002513748 |
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| Protein GI | 220934849 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTG TTTCCAAGTT TGCCGACCTC GGGTTGGCCG ATCCCCTTTT GCGTGCCCTG
GAAGAGACCG GCTATGAATC GCCGACTCCG ATCCAGGCCC AGGCCATCCC CGAAGTGCTC
AAGGGCCGCG ACCTGCGCGC CGCCGCCCAG ACCGGCACCG GCAAGACCGC CGGCTTCACC
CTGCCCATCC TGCAGCTGCT GTCCCACCGC CCCGCCCTCA AGAGCGGGCC GGGCCGACCC
CGCTGCCTGG TGCTGACCCC CACCCGTGAG CTGGCCGCCC AGGTGCACGA GTCCGTGGAG
ACCTACGGCA AGTACCTGAC CCTGCGCTCC CTGGTGATGT TCGGCGGCGT GAACATCAAT
CCACAGATCC GCGCCCTGCG CGGCCAGGTG GACATCATCG TGGCCACCCC TGGCCGCCTG
CTGGATCACG CGGGCCAGAA GACCGTGGAC CTCTCCGGCG TGGAGATCCT GGTCCTGGAC
GAGGCCGATC GCATGCTGGA CATGGGCTTC ATCCACGACA TCCGCCGCAT CATGAAACTG
CTGCCGGCCA GGCGTCAGAA CCTGCTGTTC TCCGCCACCT TCTCCGATGA GATGCGTGCC
CTGGCGGACG GCATTTTGAC CAACCCGGCC AGCGTGGAAG TGGCCGCGCG CAACACCACC
GCCGAGCGCG TGCAGCAGCA GGTGCACCTG GTGGAAAGCC ACGCCAAGCG GGATCTGCTC
AGCCACCTGA TCAAGCAGAA CCAGTGGCAG CAGGTGCTGG TGTTCACCCG CACCAAGCAC
GGCGCCAACC GCCTGGCTGA GAAGCTGTCC AAGGACGGCA TCCCGGCGGC CGCCATCCAC
GGCAACAAGA GTCAGGCGGC CCGCACCAAG GCCCTGGACC AGTTCAAGAA CGGCCGTATC
CCGGTGCTGG TGGCCACCGA CATCGCCGCC CGTGGCCTGG ACATCGACCA GCTGCCCCAG
GTGGTGAACT TCGAGTTGCC CAACGTGCCC GAGGACTACG TGCACCGCAT CGGCCGCACC
GGGCGTGCCG GTGCCGCCGG CGCTGCCCTG TCCCTGGTGG ACCGGGAGGA GATGCGCCTG
CTGACCAGCA TCGAACGGCT GATCCGCCGT CCCATCGAGC GCATCCAGAC GGAAGGCTTC
GTGGCACCGC CGAAATCCGC CAACGACGCC GACGGCAATC GCCCGCCCCG TGGTGGTCGT
CCCGGTGGTG GACGCCCAGG CAACGGTGCC CGCCAGGGCG CACCCCGTGG CGGTCGTCCC
GGTGGCGCAC CTGCTGGTGC CCGCCGTCAG GGTGCCGGGG GGCGGGGCCG TGGCGGCAAC
GGTGCCCGCA GCGGCAACCG CTAG
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| Protein sequence | MSSVSKFADL GLADPLLRAL EETGYESPTP IQAQAIPEVL KGRDLRAAAQ TGTGKTAGFT
LPILQLLSHR PALKSGPGRP RCLVLTPTRE LAAQVHESVE TYGKYLTLRS LVMFGGVNIN
PQIRALRGQV DIIVATPGRL LDHAGQKTVD LSGVEILVLD EADRMLDMGF IHDIRRIMKL
LPARRQNLLF SATFSDEMRA LADGILTNPA SVEVAARNTT AERVQQQVHL VESHAKRDLL
SHLIKQNQWQ QVLVFTRTKH GANRLAEKLS KDGIPAAAIH GNKSQAARTK ALDQFKNGRI
PVLVATDIAA RGLDIDQLPQ VVNFELPNVP EDYVHRIGRT GRAGAAGAAL SLVDREEMRL
LTSIERLIRR PIERIQTEGF VAPPKSANDA DGNRPPRGGR PGGGRPGNGA RQGAPRGGRP
GGAPAGARRQ GAGGRGRGGN GARSGNR
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