| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1675 |
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| Symbol | |
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| ID | 7316988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1775663 |
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| End bp | 1777249 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643616567 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002513745 |
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| Protein GI | 220934846 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAAAAC GCCTGGCCGA GCTGATTTTT GCCAAAGACA AGCGCCCCAG TCTCGCCCTG
GTGCGGCGCA GTGCGCTGCT GACCCTGGTC CTGCTCTGCA TCTATGCGGC CGTGAGCCTC
TACTACCTCA CCGCCCTGCA GTCCGCCATG ACCCAGGTCT CCGAGGTCCA CAACCGCAAG
GTGGAACTGA TCCACCGCAT GTCCAACGTC GTCCAGGCCC GCTCCCTGCA GCTCTACAGC
GCGGCCTTCA AGAACGACCC CTGGTTCCGG GACGAACGCT TCATGGAATT CCGCGCCGTG
GCGGTCGAGT TCATCGATTT GCGCGACCGG CTCATTGCCC TGGGCCTGGA ACCCAGGGAA
CAGGCCCTGC TGGACGACGC CCTGGACATC ATTCGCATCA CCGCACCGCT GCAGGAGGAC
ATCATGCAGC GCATCCTGGG AGGAGAAGAA GGCCCGGAGC TCTGGTCGGC CATCGTCGAC
CAGGATCTGC CCCTGGAGAT GGCCCTGCTG AACATCTTTC AGCGCCTGGC GCAGACCGTG
CAGGACAACG CCTACGCCGC GCAGCTTGAT TCCGAGGCCA GTTACCACAC GGCCCTGCGT
GTGATCGCCG TGGTCACGCT GCTGATCATC ATCTCGGTGC TCGCCGGCGC CCTGCGTGTG
CTGGTGCGCC TGAGAAGCAT CGAGAACTCC CTCAACGAGG AGAAGGAACT GGCGATCGGC
ACCCTGAACA ACATCGCCGA TGGCGTGATC GTGACCGACT CCCAGGGGTT CATCCTGTCC
ATGAACCGGG CCGCCGGCCA CATGACCGGT CTTGCACCGG AGCGCGCCCT GGGTGAATCC
ATCGACGAGG TCTACCGACT GAGCCGTCCG AGCGGCGACC CCTGCATGCC CCCCGGGGTG
TTTGCAACCC TGCTGTCGGG CGTGGCCACC CGCGCCCACC GCTACCAGAC ACTGGAAGAC
CGCCAGGGTG TCCTGCACTA CGTGGAGGAG ACCGTTTCGC CCATCTTCGA CGAGAACGAC
CAGCGCGTGC GGGTGAGCTT CATCTTCCGC GACGTGAGCG CGGACCTTGC GCACATGGAA
CAGATGACCT GGGACGCCCA GCACGATCAC CTCACCGGGG CACTCAACCG CCGCGCCTTC
GAGGTGGAAC TGCAGCGCGC CTGCCTGGAT ACCAGGCAGG GCAGGGCATG CACTCTCATC
TATCTGGACC TGGATGACTT CAAACACCTC AACGACACCC ACGGGCACCA CGCCGGCGAT
GCCTTCCTGG TGGCCCTGGT GAGGACCATG TCCAGCTGCA TCCGCCGTCA CGACAGCCTG
GCTCGCCTGG GTGGAGACGA GTTTGCCATC CTGCTCAATG ATTGCGATTT GAACAATGCC
CAACAGATCG TCGACAATCT CGCCCGTTCG ATTAGTGAGC TGACCTTCAC CTTCGAGGGT
CGCGCACTCA AGGGGGCTGG CGCCAGCATC GGCGTGCATG CCATCACATC CCGTGACACG
GACCCGGAGA CCGTCATGCG GCGCGTCGAT GAGGCCTGTT ACGTGGCCAA GCGTCGCGGC
AAAAACCAGG TCTGCATCGT GGCCTGA
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| Protein sequence | MIKRLAELIF AKDKRPSLAL VRRSALLTLV LLCIYAAVSL YYLTALQSAM TQVSEVHNRK
VELIHRMSNV VQARSLQLYS AAFKNDPWFR DERFMEFRAV AVEFIDLRDR LIALGLEPRE
QALLDDALDI IRITAPLQED IMQRILGGEE GPELWSAIVD QDLPLEMALL NIFQRLAQTV
QDNAYAAQLD SEASYHTALR VIAVVTLLII ISVLAGALRV LVRLRSIENS LNEEKELAIG
TLNNIADGVI VTDSQGFILS MNRAAGHMTG LAPERALGES IDEVYRLSRP SGDPCMPPGV
FATLLSGVAT RAHRYQTLED RQGVLHYVEE TVSPIFDEND QRVRVSFIFR DVSADLAHME
QMTWDAQHDH LTGALNRRAF EVELQRACLD TRQGRACTLI YLDLDDFKHL NDTHGHHAGD
AFLVALVRTM SSCIRRHDSL ARLGGDEFAI LLNDCDLNNA QQIVDNLARS ISELTFTFEG
RALKGAGASI GVHAITSRDT DPETVMRRVD EACYVAKRRG KNQVCIVA
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