| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1673 |
|---|
| Symbol | |
|---|
| ID | 7316986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1772709 |
|---|
| End bp | 1773593 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643616565 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_002513743 |
|---|
| Protein GI | 220934844 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGAC CGATACACGC CCCTCTACGA CACTTCACCG CGAGCGACGG CCTTCGCCTG
GGCTACCGCG CACACCGCTG CGGGCTTCCC GAGGCACCGG CCCTGGTCAC CCTGCATGGT
CTGGCCAGCA ACGGCACCCG CTTCAGCGAG TTCTGCGCCC ACAGCCGCCT GCGTGATACC
TGGGATCTCT ACCAGCCGGA CCTGCGTGGC CATGGCGCCT CCATGACCCG CAAGGCCTTT
AGTCGATGGC TCTGGTGCCA GGACCAGATC AGCCTGCTGG ACAGGGAAGG GCACGGACAG
GCGGTGTTCA TGGGCCACAG CCTGGGAGCC CAGGTGGCCA TGGAACTGGC GGTACGGCAT
CCGGACCGGG TGCGGGCGCT GATCCTCATC GACCCGGTGT TCCCCGAGGC ACTGCGCGGC
GTGCTGGCTG TCGTGCGCCG TCTCAACCTT CTCAACTGTC TGCTCGTCCC GCCCGTCAGG
CTGATCGGCC GGATCTTCGC GGCCAGTCGC CGTTTCCCCT ACCGGGACCT GCATGCCCTG
GATGCACAGG CACGTCAGAG GCTGGAAGAG GGAGAACTAC AGGATATCGT GCGCCTGTAC
ATGAGCCCAC GGGCCGATCT GCGGTTTCTG CCCCTGGCCA ACTATCTCCA GGACCTGCGC
GAGGTGGTCC GGCCCTTGCC TGGGCCCGAA CTGATCAGGC AACCAGTGCT GGTGCTGCAA
TCCGGGGAAT CCGGCATCAG CGACCCGCAG ATCACCACTC GCCAGATCCA GCTGTTTCCC
CATGCTGAAT GCGTACACAT CGACGCAGAT CACTGGCTGC TCACGGAACA ACCCGACCAA
GCACGGGATG TCATCGATCA ATGGTGCCTT GCAAGGCTCA TATAG
|
|---|
| Protein sequence | MEGPIHAPLR HFTASDGLRL GYRAHRCGLP EAPALVTLHG LASNGTRFSE FCAHSRLRDT
WDLYQPDLRG HGASMTRKAF SRWLWCQDQI SLLDREGHGQ AVFMGHSLGA QVAMELAVRH
PDRVRALILI DPVFPEALRG VLAVVRRLNL LNCLLVPPVR LIGRIFAASR RFPYRDLHAL
DAQARQRLEE GELQDIVRLY MSPRADLRFL PLANYLQDLR EVVRPLPGPE LIRQPVLVLQ
SGESGISDPQ ITTRQIQLFP HAECVHIDAD HWLLTEQPDQ ARDVIDQWCL ARLI
|
|---|
| |