| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1611 |
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| Symbol | |
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| ID | 7316237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1727636 |
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| End bp | 1730722 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616503 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002513681 |
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| Protein GI | 220934782 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.921522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTCA CCGACGTCTT CATCAAGAAG CCCGTGCTGG CCACCGTGGT CAGCCTGTTC
ATCCTGCTGC TGGGTATCCG CGCGGGCTTT GATCTCAACG TGCGCCAGTT TCCGGAGATC
AAGAACGCGG TGGTCACCGT CACCACCGCC TACATCGGCG CCGACGCGGA CCTGATCCAG
GGCTTCATCA CCACGCCCAT CGAGCGGGAG ATCGCCGCCG CCGAGGGCAT CGACTACATC
GTCTCCACCA GTGTCGCCGG CGTGAGCCTG GTGCAGGCCA ACCTGCGCCT GGACTACGAC
CCCAACGAGG CCCTGACCCA GATCGCTGCC CAGGTGAACA AGGTGCGCTC CGACCTGCCC
CTGGAGGCGG AGGAACCGGT GATCGAGCTG TCCGTGGGAC AGACCATCGC CGCCATGTAC
ATGAGCTTCT ACTCGGAGCT GCTCAGCAAC AACCAGATCA CCGATTACCT GGTGCGTGTG
GTGCAGCCCC AGCTCTCCAC CATCCCCGGG GTGCAGCGCG CCCAGATCCT CGGCGACCGC
ACCTTCGCCA TGCGCATCTG GCTGGACCCG GAACGCATGG CGGCACTCAA CGTCACCGGC
GCCGACGTGG CCGCGGCCCT GCGCGCCAAC AACGTGCTCT CCGCCGTTGG GCGCACCAAG
GGCGAGATGG TGAGCATCGA CCTGAAGGCC TCAACCGACC TCTCCAGCGC CGAGGAATTC
GAGCAACTGG TGGTGCGCGC CGAAGAGGGT GCCATCGTGC GCATCGTGGA CATCGCCGAG
GTGGAGCTGG GCTCGGAGAA CTACGACGTC TCGGTGAGCT TCAACGGCCA GTCCGCCACC
TTCATCGGCA TCGAGGTGGC CCCCGACGCC AACGCCCTGG ACGTGATCGC CGAGGTGCGC
CGGGTGTGGG CCGAGCAGAT CGAGCCACAG TTCCCCCAGG GCCTGTCCGG CGACATCGTC
TACGACTCCA CCCTCTACAT CCAGAGCGCC ATCGACGAGG TGCTGCTGAC CATCTTCCTG
GCCCTGGTGA TCGTGGTGGG CGTGATCTAC CTGTTCCTGG GCTCGGTGCG CAGCGTCATC
ATCCCGGCCC TGGCGGTGCC CCTGTCCCTG GTGGGCACCC TGTTCCTGAT GCTGCTGATG
GGCTTCTCCA TCAACCTGCT GACCCTGCTG GCCATGGTGC TGGCCATCGG CATCGTGGTG
GACGATGCCA TCATCATGGT GGAGAACATC CACCGCCACA TCGAGGAGGG CATGGCACCC
CTGGAGGCGG CCATGCGCGG CGCCCGGGAG CTGGCCTGGC CCATCGTGGC CATGTCCACC
ACCCTGGTGG CGGTGTTCCT GCCCATCGGT TTCGTAGGCG GCATCACCGG CACCCTGTTC
ATCGAGTTCG CCTTCACCCT GGCCGCCTCG GTGATCATCT CGGGCATCGT GGCCCTGACC
CTCTCGCCCA TGTTGAGCTC GCGTCTGCTT AAAGCCCATG GCGAAGGCAG CAAGGGCCGC
CTGGAGGCCT GGCTGGATGC GCGCTTCGAC GGCCTGCGCC GACGCTACCA GCGCCGTCTG
CACGGGGCGC TCGACGACAA GCACGTGGTG CTCAGCTTCG GCCTGATCGT GCTGGTCTCC
TGCTACTTCC TGTTCATCAC CAGCCCCAGC GAACTGGAGC CCGCCGAGGA CCAGGGCTTC
GTGTTCTCCA TCGCCGAGGC CGACGCGCCC ACCACCCTGG ATCACCTGGA GCGCAACACC
GCGGTGATGA ACCGCTACCT GGACGAGATC CCGGAGATGC GCAACATCTT CATCGTCAAC
GGCTTCGGCG GCGCCGGCGT GGGCGCCACC AACACGGCCA TCGCCGGTTT CGTGCTCGCC
CCCTGGGACC AGCGGGAGCG CTCCACCCAG CAGGTGCTGG AGCAGGACCT GCAGCCACGC
ATCGAGCAGA TCCCGGGGCT CAACATCTTC GCCCTGGTGC CGCCGTCCCT GCCGGGCGGT
GGCGGCGGCC CGCCGGTTGA ATTCGTGATC CGCTCCACCG AGCCCGCCGA GAACCTGCAG
GCGGTGGCCC AGGAGGTGGT CGGCCGCGCC ATGCAGAGCG GGCGCTTCAT CTTCATCGAC
GGCGATCTCA AGATCGACAA GCCGCGCACC GAGATCCACA TCGATCGGGA CAGGGCGGCG
CTCATGGGCG TGGACATGCA GAGCCTGTCT GCGGATCTCT CCGCGCTGTT TTCCGGCGGG
CCGGCGGGAC GCTTCTCCCT GGACAACCGT TCCTACCGGG TGATCCCCCA GCTGGAACGG
GTGCAGCGCC TCAACCCGGA ACAGATCGAG GACCTCTACA CCCGCAACCG GGAGGGCGAA
CTGGTCCCCC TGGCCACCCT GATCACCCTC GAGGACACGG TCCAGCCCCA GCAGCTCAAG
CGCTTCCAGC AGTTGAACAG CGTGACCCTC TCAGGTGTGC CGCGCCCCGG CGTGACCCTG
GGCGAGGCCC TGGACCTGCT GGACGGCATC GCCGCCGAGG TGCTGCCGCC GGGCTACAGC
GTGGACTACG CCGGCCAGTC CCGGCAGTTC AAGAGCGAAG GCGCCCAGCT GATCCTGACC
TTCTTCTTCG CCCTGGTGGT GATCTACCTG GTGCTGGCCG CACAGTTCGA GTCCTTCCGG
GATTCGCTGA TCATGATGAT GACCGTGCCC ATGTCCATCG CCGGGGCGCT CATCTTCGTG
AGCCTGGGCT TCGCCACCCT GAACATCTAC ACCCAGGTGG GCCTGGTGAC CCTGATCGGC
CTGATCGCCA AACACGGCAT CCTGATCGTG GAATTCGCCA ACAAGCTCCG GGAAGAGGGG
CTGTCCAAGC GTGAGGCGGT GGAGGAGGCG GCCGCCATCC GCCTGCGGCC CATCCTGATG
ACCACCGCCG CCACGGTGCT GGCCATGATC CCGCTGCTGA TCGCCGCCGG CCCCGGCGCC
GGGGCACGCT TCGCCATGGG CCTGGTGATC GCCTCCGGCA TGACCATCGG CACCCTGTTC
ACCCTGTTCG TGGTGCCCGC CATGTATGTC TACCTGTCCA GGGATCGGGC GGTGCAGACG
GCAGCCGATG AGGCGGTCAG GGTCTGA
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| Protein sequence | MRFTDVFIKK PVLATVVSLF ILLLGIRAGF DLNVRQFPEI KNAVVTVTTA YIGADADLIQ
GFITTPIERE IAAAEGIDYI VSTSVAGVSL VQANLRLDYD PNEALTQIAA QVNKVRSDLP
LEAEEPVIEL SVGQTIAAMY MSFYSELLSN NQITDYLVRV VQPQLSTIPG VQRAQILGDR
TFAMRIWLDP ERMAALNVTG ADVAAALRAN NVLSAVGRTK GEMVSIDLKA STDLSSAEEF
EQLVVRAEEG AIVRIVDIAE VELGSENYDV SVSFNGQSAT FIGIEVAPDA NALDVIAEVR
RVWAEQIEPQ FPQGLSGDIV YDSTLYIQSA IDEVLLTIFL ALVIVVGVIY LFLGSVRSVI
IPALAVPLSL VGTLFLMLLM GFSINLLTLL AMVLAIGIVV DDAIIMVENI HRHIEEGMAP
LEAAMRGARE LAWPIVAMST TLVAVFLPIG FVGGITGTLF IEFAFTLAAS VIISGIVALT
LSPMLSSRLL KAHGEGSKGR LEAWLDARFD GLRRRYQRRL HGALDDKHVV LSFGLIVLVS
CYFLFITSPS ELEPAEDQGF VFSIAEADAP TTLDHLERNT AVMNRYLDEI PEMRNIFIVN
GFGGAGVGAT NTAIAGFVLA PWDQRERSTQ QVLEQDLQPR IEQIPGLNIF ALVPPSLPGG
GGGPPVEFVI RSTEPAENLQ AVAQEVVGRA MQSGRFIFID GDLKIDKPRT EIHIDRDRAA
LMGVDMQSLS ADLSALFSGG PAGRFSLDNR SYRVIPQLER VQRLNPEQIE DLYTRNREGE
LVPLATLITL EDTVQPQQLK RFQQLNSVTL SGVPRPGVTL GEALDLLDGI AAEVLPPGYS
VDYAGQSRQF KSEGAQLILT FFFALVVIYL VLAAQFESFR DSLIMMMTVP MSIAGALIFV
SLGFATLNIY TQVGLVTLIG LIAKHGILIV EFANKLREEG LSKREAVEEA AAIRLRPILM
TTAATVLAMI PLLIAAGPGA GARFAMGLVI ASGMTIGTLF TLFVVPAMYV YLSRDRAVQT
AADEAVRV
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