Gene Tgr7_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1610 
Symbol 
ID7316236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1726502 
End bp1727620 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content70% 
IMG OID643616502 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002513680 
Protein GI220934781 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC GCATGATCAT CATGCTGTTG GGCGTCGGCA TCCTGTTCGG CGGCATCTTC 
GGCTTCAAGG CCTTCGTCAA TGCCATGATC GCCGACTTCT TCGACAACAT GCCCATGCCC
ACGGCCACCA TCACCGCGGG CGAGGCCCGG GAGATCCCCT GGACCCGGGA ACTGGAGGCG
GTCGGCAGCT TCACGGCGGT GCAGGGGGCC ATGCTCACCA GCGAGGTGGG CGGCATCGTG
CGCGAGATCC GCTTCCAGAA CGGCGCCCGG GTGGAGGCGG GGCAGGTGCT GCTGGTGCTG
GACGACGAGA GCGACCAGGC GCGCCTGCGC AGCCTGGAGG CGGCCCAGCG GCTGGCGGAC
CTGGAGCTGC AGCGTGCCCG CCGCCTGGCC GCCCAGAACA ACATCTCCGA GGCGGAACTG
ACCCGTCGCG AGAGCGAGGC GGAGCAGGCC ATCGCCGCGG TCAACGAACA GCGGGCGCGC
ATCCGCCAGA AGTCTGTGCG CGCCCCCTTC AGCGGCGATC TGGGCATCCG CCAGGTGAAC
GTGGGCCAGT TCCTCTCTGC CGGCGACCCG GTGGTCTCGC TGCAGTCCGT GGACCCCATC
TACCTGGACT TCAGCCTGCC CGAGCGGCGC ATCGGCGAGA TCCGCCGCGA GCAGACCGTC
AACGTGCGCG TGGACGCCCT GGGGCGCGAG GTTCAGGGCC GCGTCAATGC CATCGAGCCG
GCGGTGAGCG CCAGCACCCG CACCCTGCGC GTGCAGGCCA CCCTCGACAA CAAGGACGGC
AGCCTGCGCG CCGGCATGTT CGGGCGTGTG CGCCTGGAGA CCGGCGAGCC CGAGCAGCGC
GTGGTGGTGC CCCAGAGCGC CATCAGTTTC AGCCCCTACG GCAATTCCGT GTACGTGATC
AGCGAGGACG AGGAGGGCCA GCTCATCGTC AACCGGCGCT TCATCCAGAC CGCCGAGCGG
CGCGGCGACC TGGTGGTGGT CACGGAGGGC CTGTCCCCCG GGGACCGGGT GGCCACCAGC
GGGCTGCTCA AGCTGCGCAA CGGAAGCCGG GTCGAGATCA GCGACGACGA ACAGGTCCAG
CCCCGGGAAT CCCTGGCGCC ACGGCCCGAC AACGCCTGA
 
Protein sequence
MNKRMIIMLL GVGILFGGIF GFKAFVNAMI ADFFDNMPMP TATITAGEAR EIPWTRELEA 
VGSFTAVQGA MLTSEVGGIV REIRFQNGAR VEAGQVLLVL DDESDQARLR SLEAAQRLAD
LELQRARRLA AQNNISEAEL TRRESEAEQA IAAVNEQRAR IRQKSVRAPF SGDLGIRQVN
VGQFLSAGDP VVSLQSVDPI YLDFSLPERR IGEIRREQTV NVRVDALGRE VQGRVNAIEP
AVSASTRTLR VQATLDNKDG SLRAGMFGRV RLETGEPEQR VVVPQSAISF SPYGNSVYVI
SEDEEGQLIV NRRFIQTAER RGDLVVVTEG LSPGDRVATS GLLKLRNGSR VEISDDEQVQ
PRESLAPRPD NA