| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1608 |
|---|
| Symbol | |
|---|
| ID | 7316234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1723535 |
|---|
| End bp | 1725499 |
|---|
| Gene Length | 1965 bp |
|---|
| Protein Length | 654 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643616500 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_002513678 |
|---|
| Protein GI | 220934779 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCT TCCAGCACCA GGACCGGGCC CGGCGCCAGA GCCGGCGGCT GGTCCTCCTG
TTTGCCCTGG CGGTGCTCGG CATCGTCCTG CTGGTGAACC TGGTGGCCCT GCTGCTGTTC
GGCCGCTTCC AGCGCCCGGA CGAGTCCATG TTGAGCGCCG GTTTTCTGCA GCGTCACCTG
GGCGTGATCG TCTGGAGCAC GGCCCTGAGC GGCGGCCTCA TCGCCCTGGG CAGCCTGTTC
CGCATGGTGA ACCTGCGCGC CGGTGGCGGG GTGGTGGCCC GGGAGCTGGG CGGGACCCTG
GTGGAACCGG ACACCAATGA CCCCCTGCGC CGGCGCCTGC GCAACGTGGT GGAGGAGATG
GCCATCGCCT CCGGCGTGCC GGTGCCGGAG ATCTACGTGC TGGAACACGA GTCCGGCATC
AATGCCTTCG CCGCGGGCTA TTCCACCGCC GACGCCGCCG TGGCAGTCAC CCGGGGCACC
CTGGAACACC TGGATCGCGA CGAGCTGCAA GGGGTCATCG CCCACGAGTT CAGCCATATC
CTCAATGGCG ACATGCGCCT GAACATCCGT CTCATGGGCA TCCTGTTCGG CATCCTGGTC
ATGGCCATGA TCGGCCGGCA GCTCATGGCC TCGGTCCGCT ACGTCTCCAC CCGCCGCTCC
AAGGACAACA GCGGCGTGGC CGCCATCGTG ATCCTGGGGC TTGCCGTGAT GCTGGTGGGT
TACGTGGGCC TGTTCTTCGC CCGCTGGATC AAGGCCATGG TGTCCCGGCA GCGGGAATAC
CTGGCGGACG CCTCGGCGGT GCAGTTCACC CGCCAGTCCG AGGGGATCGC GGGTGCCCTG
AAAAAGATCG GTGCTGCCGG GGCCGGTTCA GTCATCAATG CCAACAGCGA GGAAGTGGCC
CACATGCTGT TCGCCAACGG CGCCATGGGG CAGATGTTTG CCACCCATCC GCCCCTGGTG
GAACGCATCC GTGCCATCGA GCCGGGCTTC GATCCCGAGG AACTCAAAAC CATCCGCGCG
CAGATGCAGC GCCATGCCCA GGCACGCCGG GCGGCTGCCG AGGAGGAGGC GGCCCGCGAG
GCGGCCGGAC AGGGCAGGGC AGCAGGCCCC GGCGGATTGC CCCTGGATGC GGACAGCCTG
ATCGAGCAGA TGGGCCAACC GGGCATGGGC CAGGTGCTGG CCGCCGCGCT GCTGGTGGCC
GCCATTCCCC GTCCCCTGGA ACGGGCCGCC CACTCGCCGG AATGGGCCCC GGAGCTGATC
TGCTACCTGC TGCTGGACCC CGACGAGGCC ATCCGTGAAC ACCAGCTGCT CATGGTGGCC
GAGACCCTGG GCGCGGAAAG CGAGGCCCAG GTGCGCAAGC TGCTGCACAT GGAACCCCGG
GTCGCCCCGG AGCTGCGCAT CCCGCTGCTG GAGATCGCCT TCCCGGCGAT ACGCCGCCGG
CCCGAGTCGG AGCGGGAAGA CCTGCGTGGC CTGGTGGAGC GCATGATCCA CGCGGACGGC
CGTGTGGACG TGTTCGAATA TGCCCTGGCC CGTCTGCTCA CCCGGCACCT GGACGATGCC
GCCCATCCCA GCCGTGCCCG GCCCGGCGGC CGGCGGGACC TGTCAGCCCT GCGCGCCCAG
GCCATGGACC TGCTGGGCAT CGTGGCCGGC CATGGCCATC CGGACAACCC GGACCAGGCC
CTGGCCGCGC TCAATGCCGG ACTGGCCGTG CTCGACTTCG CTTCCGTCCC CCGGATGCCA
TCCACCGAGA CCTGGCCGGA TCGCCTGGAC GCCGCCCTGG AACGCCTCGA CGAGCTGCAG
CCCCAGGCCA AGGAGCAACT GCTGCGCGGG CTGGTGGCCA CCATCACCCA CCGCGGTCAG
ACCGTCACCG CCGAGGCGGA ACTGCTGCGC GCCATCTGCG CGGCCCTGCA CATGCCGCTG
CCCATCGGTG CGTTTGAGGC CGGAGAGGGT GGAGAGAGTA ATTAA
|
|---|
| Protein sequence | MNFFQHQDRA RRQSRRLVLL FALAVLGIVL LVNLVALLLF GRFQRPDESM LSAGFLQRHL
GVIVWSTALS GGLIALGSLF RMVNLRAGGG VVARELGGTL VEPDTNDPLR RRLRNVVEEM
AIASGVPVPE IYVLEHESGI NAFAAGYSTA DAAVAVTRGT LEHLDRDELQ GVIAHEFSHI
LNGDMRLNIR LMGILFGILV MAMIGRQLMA SVRYVSTRRS KDNSGVAAIV ILGLAVMLVG
YVGLFFARWI KAMVSRQREY LADASAVQFT RQSEGIAGAL KKIGAAGAGS VINANSEEVA
HMLFANGAMG QMFATHPPLV ERIRAIEPGF DPEELKTIRA QMQRHAQARR AAAEEEAARE
AAGQGRAAGP GGLPLDADSL IEQMGQPGMG QVLAAALLVA AIPRPLERAA HSPEWAPELI
CYLLLDPDEA IREHQLLMVA ETLGAESEAQ VRKLLHMEPR VAPELRIPLL EIAFPAIRRR
PESEREDLRG LVERMIHADG RVDVFEYALA RLLTRHLDDA AHPSRARPGG RRDLSALRAQ
AMDLLGIVAG HGHPDNPDQA LAALNAGLAV LDFASVPRMP STETWPDRLD AALERLDELQ
PQAKEQLLRG LVATITHRGQ TVTAEAELLR AICAALHMPL PIGAFEAGEG GESN
|
|---|
| |