| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1596 |
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| Symbol | |
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| ID | 7316222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1712701 |
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| End bp | 1714266 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643616488 |
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| Product | serine phosphatase RsbU |
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| Protein accession | YP_002513666 |
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| Protein GI | 220934767 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.242086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACCC GCGTGAGGCA GACGGACGGC GCGAGCACTG ATGCCACGCG AGGCATCCCC
TTCACAGCCA GTCTGACCTT CCGCCAGGCT GCGGTGACCT TGCTCATCGT GGCGGTGCTG
GGTCTGCTGG CCGGCATGGT GGAACTGGGC GCCGACTGGA AGTCCATGCG CGCCGAGATC
CAGGAACACA CCCATCGCAG TCTGGAACTG GTCAGCGGCT CCGCCGCCGA GGCCGCTTTC
CAGTTCAACG ATGAACTGGC GGGTCAGGTG GTGGACGGTC TGTTTGCCCA CCGGGAAATG
GAACAGGTGG TACTGCGGGA TAATTTCGGA GGCGTCATCG CAGAGCGTCA GCGTCACGAC
CTGGCTGAAC CGGGTGCGCT GGTGCAGCGC CTGTTCGGTG ACATCACGCG TTACTCCGTT
AATCTGAGTC ACAGCGTTGG CGGGGCGTCG GCCTCCAGCG TGGGCGCCCT GGAAGTGACG
CTCGCCCCCG GCGAGATCGG CGCCCGCTTC GTGGAGCGGG GTCTGGTGAT CTTTGTGGTG
GGTCTGGCCA AGGCGGTGAT CATCTCCGCC CTGGTGGTAC TGATCTTCTT TTTCATGATC
ACCCGCCCCC TGATCGGTCT GCATACCGCC ATCACGCGCA TAGATCCTAC CCGTCCCGGA
CATTGGCCCC GGCCGAGCTT CCCGCGCCAC GAGAAGGACG AACTGGGCCA GATCGTGACC
GGCCTGGACA ATCTCATGCA GGCCTTTCAG CAGGGTCTGG AACAGCGTGA CCGGGCCCGG
GACGAGAACA TGCGCCTGGG TGCCGAGTTG GACGTCTCCC GTCGCATCCA GCAGATCCTG
CTGCCCTCAC GGGCGGAGCT GGATGCCATC GAGGGCCTGG ACATCGCCAC CCACATGGAG
GCGGCTCAGG AGGTGGGCGG CGATTACTAC GACATCCTCA GTCACGAGGA CGGCGTGCGC
ATCGGTATCG GTGACGTGAC CGGTCACGGA CTCGAGAGTG GCGTGGTGAT GCTCATGACC
CAGAGCGCCG TGCGCACCCT GCTCACCAGC CGTGAGAAGG ACATGGTGCG CGTCATGGAC
GTACTCAACA CCACCATCTA CAACAACGTG CAGCGCATGG GCTGCGGCAA GAACCTGACC
CTTGCCCTGC TGGATTACAC CATGGCAACT GCTGCCGAAC TACCTGCGGT GGCGGGCCAC
CTGCGTATCA GCGGCCAGCA TGAAACGGTC ATTATCGCCC GCCATGACGG ACACATGGAG
GTGGTGGACA CCGACGAACT CGGCTTCCCC ATCGGCCTGG TGGAGGAGAT GGCCCATTTC
GTGGGTGAGA TCAATCTGGA TCTGCACCAG GGGGATGTGG TGGTGCTCTA CACCGATGGC
ATCACCGAGG CGGCCGACGA GCAGCATCGC CTCTATGGAC AGGATCGACT GATGGAGATG
ATCGCCAGCC ATCGTGCCGA GTCAGCGGAA TTCATCAAGG ACGCCATCAT CAACGACGTG
AAACGTCACA TCGGAAACCA GACGCTCTAC GATGACCTCA CCCTGGTCAT CCTGAAGCAG
AAATAA
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| Protein sequence | MDTRVRQTDG ASTDATRGIP FTASLTFRQA AVTLLIVAVL GLLAGMVELG ADWKSMRAEI
QEHTHRSLEL VSGSAAEAAF QFNDELAGQV VDGLFAHREM EQVVLRDNFG GVIAERQRHD
LAEPGALVQR LFGDITRYSV NLSHSVGGAS ASSVGALEVT LAPGEIGARF VERGLVIFVV
GLAKAVIISA LVVLIFFFMI TRPLIGLHTA ITRIDPTRPG HWPRPSFPRH EKDELGQIVT
GLDNLMQAFQ QGLEQRDRAR DENMRLGAEL DVSRRIQQIL LPSRAELDAI EGLDIATHME
AAQEVGGDYY DILSHEDGVR IGIGDVTGHG LESGVVMLMT QSAVRTLLTS REKDMVRVMD
VLNTTIYNNV QRMGCGKNLT LALLDYTMAT AAELPAVAGH LRISGQHETV IIARHDGHME
VVDTDELGFP IGLVEEMAHF VGEINLDLHQ GDVVVLYTDG ITEAADEQHR LYGQDRLMEM
IASHRAESAE FIKDAIINDV KRHIGNQTLY DDLTLVILKQ K
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