| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1594 |
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| Symbol | |
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| ID | 7316220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1710480 |
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| End bp | 1711841 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643616486 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_002513664 |
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| Protein GI | 220934765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA CCGTCAAATA CGTCCTCGAC GAGAAGGACA TTCCCAGGCA CTGGTACAAC
ATCATGGCGG ACCTGCCTTC CCCGCCGCCG CCCGTGCTGC ATCCCGCCAC ACACCAGCCG
GTGGGTCCCG ACGACCTGGC GCCGCTCTTC CCCATGGCCG TGATCCAGCA GGAGGTCAGC
CAGGAGCGGG AGATCGAGAT CCCGGAGCCG GTACGCGAGG TCTATCGTCA GTGGCGGCCC
TCGCCCCTGT TCCGCGCCCG TCGTCTGGAG AAGATGCTCG ATACCCCGGC GCGCATCTAT
TACAAGTACG AAGGCGTCAG TCCTGCCGGT TCCCACAAGC CCAACACCGC CATCGCCCAG
GCCTTCTACA ACAAGCAGGA AGGCGTCAAA CGCATCACCA CCGAGACCGG TGCCGGTCAG
TGGGGCTCGT CCCTGGCACT GGCGGGTTCC CTGTTCGGCC TGGAGATCGA GGTCTTCATG
GTCAAGGTGA GCTTCCAGCA AAAGCCCTAC CGGCGTTCCT TCATGGAGAC CTTCGGCGCC
AAGTGCATCG CCAGTCCCTC GGACATGACC GAGGCGGGCC GGGCCGTGCT CAGGGAACAC
CCGGACAGCA CCGGCAGCCT GGGTATCGCC ATCAGCGAGG CGGTGGAGCG CGCGGTGCAG
CGGGACGACA CCAAGTACGC CCTGGGCAGC GTGCTCAACC ACGTGCTGCT GCACCAGACG
GTGATCGGTC TGGAGGCCAT GAAGCAGTTC GACCTGGCCG GTGACTACCC GGACATCGTC
ATCGCCCCCA CCGGCGGCGG CAGCAACTTC GGTGGCATCA CCTTCCCCTT CCTGGGCGAG
CAGCTGCGCG GCGGCCGCAA GATCGACCTG GTGGCGGTGG AGCCCTCCGC CTGCCCGACC
CTGACCCGGG GCAAGTACGC CTACGACTTC GGCGACACCG CGCATCTCAC CCCGCTGGTG
AAGATGCACA CCCTGGGCTC CACCTATGTG CCGCCCGGTT TCCACGCCGG TGGCCTGCGC
TATCACGGCA TGGCGCCCCT GGTGTCACAC ATCACAGATC TCGGACTGGT ACGGCCCCGC
GCCTATCAGC AGACCGAGTG CTTCGAGGCG GGCATCCTGT TCGCCAAGGC GGAAGGCATC
ATCCCGGCGC CCGAGGCCAA CCACGGCGTG AAGGCGGCCA TCGACGAGGC CCTGCGCTGC
AAGGAGGAAG GAGTGAGCCG CGCGATCCTG TTCAACCTGT GCGGCCATGG TCACTTCGAC
ATGCAGGCCT ATCGCGATTA CCTGGACGGC AAGCTGGTGG ATCAGGAATA CGACGAGTCC
GAGATCGCCA TGGCACTGGC TGGGCTGCCT TCGGTGGCGT AA
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| Protein sequence | MSDTVKYVLD EKDIPRHWYN IMADLPSPPP PVLHPATHQP VGPDDLAPLF PMAVIQQEVS
QEREIEIPEP VREVYRQWRP SPLFRARRLE KMLDTPARIY YKYEGVSPAG SHKPNTAIAQ
AFYNKQEGVK RITTETGAGQ WGSSLALAGS LFGLEIEVFM VKVSFQQKPY RRSFMETFGA
KCIASPSDMT EAGRAVLREH PDSTGSLGIA ISEAVERAVQ RDDTKYALGS VLNHVLLHQT
VIGLEAMKQF DLAGDYPDIV IAPTGGGSNF GGITFPFLGE QLRGGRKIDL VAVEPSACPT
LTRGKYAYDF GDTAHLTPLV KMHTLGSTYV PPGFHAGGLR YHGMAPLVSH ITDLGLVRPR
AYQQTECFEA GILFAKAEGI IPAPEANHGV KAAIDEALRC KEEGVSRAIL FNLCGHGHFD
MQAYRDYLDG KLVDQEYDES EIAMALAGLP SVA
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