Gene Tgr7_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1585 
Symbol 
ID7316211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1703804 
End bp1704460 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID643616478 
Productprotein of unknown function DUF583 
Protein accessionYP_002513656 
Protein GI220934757 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.397214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGT TTGATATCGG TAAGCGCGGG TTTGGCGGCA ACCAGGAATC CAAGGGCGAG 
GAGAAGGATT TACTGCGTGA TCCTGACGGC TTCAAGGGCG GGGTTGCACA AGCCCCTGCG 
GTGGGCATGG CGCGTCACCG GGACGCGGCC ATCATCGGCC CTTCGATCCA CATCGAAGGC 
ACCCTGCGCG GTGAAGAGGA CCTGATCATC GAAGGTCGCG TCAGCGGTAC GGTGAAGCTG 
CAGGGCCACT GCCTGACCGT GGGTAGTCAT GGCCAGATCA GTGCCAATAT TTACGCCCAT 
ACCGTGGTCG TGGACGGTAC CGTTGAAGGT GACCTGTTCG GTGCAGAACG CGTGGTGATC 
AAGAAGTCCG CGAACATCAC GGGGAACATC ACTTCGCCAC GGGTCAGCCT CGAAGAGGGC 
GCGCGCTTCA AGGGGAGCAT CGAGATGGAT GCCCAGGCGG TTGAGGCCAT CATGGGGGCG 
CAGAAGTCAA AATCCGCTTC CAGCCAGACC CCTGAACGTT CCCCTGCCCA GGCCCCTGAC 
AAGGCCCGCA ACGAGACAGC AACAACCGCG GGTGCCTCAT CATCAGGTAC GGGCGATACG 
GCCGCTGAAT CAGGCAAGTC TGCAACCACT GGCAAGGTGA GCGGCAGCGT CGGTTGA
 
Protein sequence
MAMFDIGKRG FGGNQESKGE EKDLLRDPDG FKGGVAQAPA VGMARHRDAA IIGPSIHIEG 
TLRGEEDLII EGRVSGTVKL QGHCLTVGSH GQISANIYAH TVVVDGTVEG DLFGAERVVI 
KKSANITGNI TSPRVSLEEG ARFKGSIEMD AQAVEAIMGA QKSKSASSQT PERSPAQAPD 
KARNETATTA GASSSGTGDT AAESGKSATT GKVSGSVG