| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1583 |
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| Symbol | |
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| ID | 7316209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1698702 |
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| End bp | 1700396 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616476 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002513654 |
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| Protein GI | 220934755 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.936512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTC TCAATCACTG GGCCCTTGGC CTGTGCCTGC TCGTCTTTTC CGGCCTCCTG
CCGGCCGCGG AGGACCTGGA ATTCACCCTC TGGCAGGACG GCGTTGAGGC CTTCGTGGAA
TACCCGCCGC TGCGGGTGAG TGAGCCCGCC CGGCTGATCA CCCACCTGAC CCTGCTGGAC
GGCAACCACC CTGTGCGCGA GGGTGAACTG ACCCTGATCC TGGAACGCGC CGACGGTTTC
GAGCAGTACC TGACGGTGGA CGCCCCGGCC CGTACCGGCA TCTACCTCCC TGAACTGGTG
CCAGAACGCC CGGGTATCTA CACGCTCACC CTGCATCTGG AACATCCCCA GGCGGGGGTT
CGGCGCCTGT GGGTGGAGGG CATCCGGGTG GCCGATGAAA GCGGTCGCGT GCCATCGGAT
CCGGGACACG GCCACGACCA TGGTGATGAG CATGGCCATG AGCACCCAAC TGCCGAGCCT
CACGGCGATC ACGGACATGA GCACCCCCAG GAATCAGCGG CAGCCCATGG ACATGACCAT
GGGGCCGACG ACGCCCATGG ACACGATCAC CCGCATGAAG ATTCCGGCGC TCAAGGCGAC
CACGGGCACG CCCACGATGA GGAGAGCTAC ATCACCTTCC TCAAGGAGCA GCAGTGGCGC
ATGGCCTTTT CCGGAGAATT TGTCATCACC CAGGAGATCG CACCACGCCT GAGCATGCCT
GCCGTGGTCG AAGCGGTGCC CGGTCGTCAG GCGGAGGTGG TCGCCCCCAT GCGCGGCACC
CTGCGCGCGG CCGATGGCAG TGCCTGGGTG CAACCGGGCA TGAAGGTCAC TGCCGGCCAG
GCGCTGGCGG CGATCACTCC ACTGGCCGGG CTCGAGGACA TCGCGCAGCT CGAAGCGGAC
CTAAGGGCTG CTGAGGCGCG CCTTGCGCTG GCCAGAAGTG AACTTGAGCG TGTGCGGGTT
CTGGTGACGG ACGGCGTGGT ATCCGAACGC CGTCTACGCG AGGCACAGGC CGAACATGAC
ACCGCGCTGG GCGCACACGA AGCCGCCGTC ACGCGTTTCA GGGGGTCTCG CGGCACCACC
CCCGCACGCG GTACGAGCCT GTCCTTGCGT ACGCCGATGG ACGGCGTGGT GGTGGCAAGC
CATGGGGCCC CTGGTCAGGT GGTAGAGGCC GGTGCGCGTA TCGCCCGCGT ACTGGACGAT
CGCCGTGTCT GGGTGCGTGT TCACGTCCCC GCCCAGGATC TGGCATTGCT GGAGACACCT
CATGATCTGC GTATCCGCCG CCCCGGTGAT CGTGCCTGGA CAACGCCTGT GGAGAGCATT
CTCGTGTACC GGGGCCTGGA GCTGGACCAG GGCGCACTGC CTCTGGTGTA TGAGGTCGAC
AACACCACAG ACCCGGGTTC ACACCTGAGC GTGGGCCTCC CCTTGATCGC AAGCCTGGCA
ACCGGTGCCC CGCAGACACG GCTCACCGTG CCGGAGTCGG CGGTCCTGGA TGATGACGGC
ATGGCCGTGG TGATCGTGCA GCACGGTGGC GAATCCTTCG AGCGTCGTCT CGTGCGACTG
GGTACGCGCG CCACCGGGCG CGTCGCCGTC CTGGACGGTC TGGAGGCTGG CGAGCGGGTG
ATCGTCGAGG GTGCCTACGC GGTGCTCCTG GCGGGACGCG AGACCGGTGA AATCGGTCAC
GGCCACGCCC ACTGA
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| Protein sequence | MTSLNHWALG LCLLVFSGLL PAAEDLEFTL WQDGVEAFVE YPPLRVSEPA RLITHLTLLD
GNHPVREGEL TLILERADGF EQYLTVDAPA RTGIYLPELV PERPGIYTLT LHLEHPQAGV
RRLWVEGIRV ADESGRVPSD PGHGHDHGDE HGHEHPTAEP HGDHGHEHPQ ESAAAHGHDH
GADDAHGHDH PHEDSGAQGD HGHAHDEESY ITFLKEQQWR MAFSGEFVIT QEIAPRLSMP
AVVEAVPGRQ AEVVAPMRGT LRAADGSAWV QPGMKVTAGQ ALAAITPLAG LEDIAQLEAD
LRAAEARLAL ARSELERVRV LVTDGVVSER RLREAQAEHD TALGAHEAAV TRFRGSRGTT
PARGTSLSLR TPMDGVVVAS HGAPGQVVEA GARIARVLDD RRVWVRVHVP AQDLALLETP
HDLRIRRPGD RAWTTPVESI LVYRGLELDQ GALPLVYEVD NTTDPGSHLS VGLPLIASLA
TGAPQTRLTV PESAVLDDDG MAVVIVQHGG ESFERRLVRL GTRATGRVAV LDGLEAGERV
IVEGAYAVLL AGRETGEIGH GHAH
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