| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1575 |
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| Symbol | |
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| ID | 7316199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1690460 |
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| End bp | 1691842 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616466 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_002513646 |
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| Protein GI | 220934747 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.785224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGCC AGATCCTGCC CCTCATCCTG CTACTGCTCG CCGGTCTGAA CACTGCCAGC
GCCCAGAACC TGCTGCCGGC ACAGGTCAAC CGCGTCATCC AGGCCCATGG CATGGACCCG
GCCAGAGTCG CCATCTGGGT ACAGCCCGTG AATGCCGATA AGCCCTGGCT GGCCCACAAC
CCGGACACCG CCCTCAACCC CGCCTCGGTG ATCAAGCTGG CCACCAGCCT GGCGGCCCTG
GAGGTGCTCG GTCCGGCCTA CACCTGGAAG ACCCGGGTGC ACCTGGGGGG ACCGGTGGAG
CAGGGGGTGC TCAAGGGGGA CCTGTGGCTC ATCGGCGGCG GCGACCCCTT CCTGGTCACC
GAGGAATTCT GGAAGCTGCT CGGGGCGCTG CGCCGCCAGG GCATCCGGCG CATCGAGGGG
GACCTGGTCT TCGACCTGTC CTACTTCCGC TTGCCCGATG AGGAGCCGGC CGCCTTCGAC
GGACAGCCCC ACCGGGTCTA CAACCAGGGG CCGCACCCGC TGCTGGTGAA CTTCAACGCC
CTGCACGTGG AGGTGATGCC GGATCCGGAC GGCGACGCGG TGAGCGCCGT GGTGGACCCG
CCCATCGCGG GACTGCACAT CGACAACCGC CTGCGCCAGC GTGCCGGACC CTGCGGCGGG
TATCGCCTGG GGATCAGCTA CCGGGTGCTG GAGGAGCGGA CCGGCATCGG CCTGGACGGA
CGCTTCCCGG GCAGTTGCGG ACCCCACCGA TTCGCCCGCA CGGCACTCAC GCCCGAGGCC
TACGTACACG GGTTGTTCAG GAGTCTCTGG GCCCAGTGGG GCGGGGAGTT CGAGGGCGGC
TGGCGGGTGG ATACCTGGAG CGATGTCGAA CGCGAACCCA CCCTGGTGCA TGAATCCCGG
CCCCTGGGCG AACTCATCCG GCTGGCCAAC AAGCACAGCA ACAACGTCAT GACCCGGCAC
TTCGAGCTGA CCCTGGGCGC CGAGACCTTC GGCATGCCGG CCACCCCGGA GAAGGGCCTG
AACGCCATCC TGGACTACCT GGCCGCCCGG GGCATCGACA GCAAGGGCCT GGTCCTGGAC
AACGCCGCCG GCCTGTCGCG TCACAACCGC GTCACCGCCC GGCAACTGGC AGGCATCCTG
CGTGCCGGGC GGCAGAGCCC CCTTCATGCC GGAATTCATC TCCTCTCTGG CCCTGGCCGG
TCTGGACGGC ACCCTGCGCA GCCGCTTCGA GGACGATCCT GCCGCAGGGC GCATGCACCT
CAAAACCGGT TTCCTGGAAG GGGTGTCCAG CATCGCCGGC TACGTGAAGA CCGCCACCGG
CGAGGACGTG ATGGTGGTGG TGATGGCCAA CGGCCCGGGC GTGCAGTGGA GCACGGGCAT
TGA
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| Protein sequence | MLRQILPLIL LLLAGLNTAS AQNLLPAQVN RVIQAHGMDP ARVAIWVQPV NADKPWLAHN
PDTALNPASV IKLATSLAAL EVLGPAYTWK TRVHLGGPVE QGVLKGDLWL IGGGDPFLVT
EEFWKLLGAL RRQGIRRIEG DLVFDLSYFR LPDEEPAAFD GQPHRVYNQG PHPLLVNFNA
LHVEVMPDPD GDAVSAVVDP PIAGLHIDNR LRQRAGPCGG YRLGISYRVL EERTGIGLDG
RFPGSCGPHR FARTALTPEA YVHGLFRSLW AQWGGEFEGG WRVDTWSDVE REPTLVHESR
PLGELIRLAN KHSNNVMTRH FELTLGAETF GMPATPEKGL NAILDYLAAR GIDSKGLVLD
NAAGLSRHNR VTARQLAGIL RAGRQSPLHA GIHLLSGPGR SGRHPAQPLR GRSCRRAHAP
QNRFPGRGVQ HRRLREDRHR RGRDGGGDGQ RPGRAVEHGH
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