Gene Tgr7_1566 details

Gene Information

• Locus tag: Tgr7_1566
• ID: 7316190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1679531
• End bp: 1680139
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643616457
• Product: aspartyl protease-like protein
• Protein accession: YP_002513637
• Protein GI: 220934738
• COG category: [R] General function prediction only
• COG ID: [COG3577] Predicted aspartyl protease
• TIGRFAM ID: [TIGR02281] clan AA aspartic protease, TIGR02281 family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCTCTC TGCCCGCCCA GGCGCGGGAC GTGGTGGTGC TGGGTATCTT TCCCGACCGC 
GCCATGCTCG AAGTGGATGG CAAGCGCCAG GTGATGCGCG TGGGTGAACG CAGCGAAGAG 
GGCGTTCACC TGCTGTCCAC GGACAGCCGG GCCGGGCACG TGGTGCTGGA CATCAACGGA 
CAGCGGCGTC AGGTGGCCCT GGGCGGACGG GCCGGCGGGA ACTTCCAGGC CCGTGAGTCG 
GCCCGGGCAC AGATCTATGC CGACTCCCGT GGTTCCTATA CCACCACAGG CAGCATCAAC 
GGCCGCACCA TCACCTTCCT GGTGGACACC GGTGCCACCA GCATCGCCAT GAGTTCCAAC 
GAGGCGCAGC GTCTGGGCAT CGACTACACC CGGGGCCAGC TCACCCAGGC GCGCACGGCC 
TCGGGGACCA CGTTCGCCTA TGAGGTCACC CTGGACCGGG TGCGCGTGGG CGAGATCGAG 
CAGCGCAATG TCCGGGCCAT GGTCCTGCCC GGCAACTCCC CCCACATTGC CCTGCTGGGC 
ATGACCTTCC TGAGCCGCGT CGAGATGCGC AACGAGGGGC AGGCGCTGAT CCTGGAACAG 
CGGTTCTGA 

 

Protein sequence

MLSLPAQARD VVVLGIFPDR AMLEVDGKRQ VMRVGERSEE GVHLLSTDSR AGHVVLDING 
QRRQVALGGR AGGNFQARES ARAQIYADSR GSYTTTGSIN GRTITFLVDT GATSIAMSSN 
EAQRLGIDYT RGQLTQARTA SGTTFAYEVT LDRVRVGEIE QRNVRAMVLP GNSPHIALLG 
MTFLSRVEMR NEGQALILEQ RF