Gene Tgr7_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1563 
Symbol 
ID7316187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1677308 
End bp1677757 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID643616454 
ProductNusB antitermination factor 
Protein accessionYP_002513634 
Protein GI220934735 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGGAC CCGACAATCG ACGCCTGAGC CACGCCCGCC GCCAGTCCCG GCGCGTGGCC 
ATGCAGGCCC TCTACCAGTG GCAGCTCACC GGCTACCACC CCAAGGACAT CCTGTTGCAG
TACCGGGAAG ACCCGGAGCT GGAGAAGGCC GATGCGGATT ACTTCCGGGA ACTGCTGCTG
GGCGTCACCG AACAGGTGGA CGAACTGGAC GAACTGCTCG CACCCCAGAT GGACCGCAGC
GTCGCCGAGC TGGACCCGGT GGAACGTGCC ATCCTGCGCC TGGCCACCTT CGAACTGAAG
CAGCGCATCG ATATTCCCTA CCGGGTGGTC ATCAACGAGG CGGTGGAACT GACCAAGAAA
TTCGGCGCCA CCGACGCCCA CAAGTTCGTC AACGGCGTGC TGGACAAGCT GGGGCGTCAG
CTGCGGGCCA TGGAAGCCTC GGCTAACTGA
 
Protein sequence
MTGPDNRRLS HARRQSRRVA MQALYQWQLT GYHPKDILLQ YREDPELEKA DADYFRELLL 
GVTEQVDELD ELLAPQMDRS VAELDPVERA ILRLATFELK QRIDIPYRVV INEAVELTKK
FGATDAHKFV NGVLDKLGRQ LRAMEASAN