Gene Tgr7_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1558 
Symbol 
ID7316182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1672858 
End bp1673376 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID643616449 
ProductATP-cone domain protein 
Protein accessionYP_002513629 
Protein GI220934730 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.609001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGCC CCTTCTGCGG AGCCCCCGAT ACCCGGGTGA TCGATTCACG GCTTGCAGGT 
GAAGGCGACC AGGTGCGCCG TCGTCGCGAG TGCCTCTCCT GTTCCGAGCG CTTCACCACC 
TACGAGAACG CGGAGCTGAA CATGCCCCGG GTGGTCAAGC GCGACGGCTC CCGGGAGCCG 
TTCAACGAGG ACAAGCTCAA GTCCGGCATG ACCCATGCGC TGGAGAAGCG CGCCGTGTCC 
ACGGACAAGG TGGAAGAGGC GGTGGCGCGC ATCAAGCGCA AGCTGCTGGG CCAGGGCGAG 
CGGGAGGTGG ATTCCCGGCG CATCGGCGAG TGGGTCATGG AAGAACTGCG CAACCTGGAC 
CAGGTGGCCT ACATCCGCTT CGCCTCGGTG TACCTGAGCT TCGCCGACGT GCAGGCCTTC 
CGGGAGGTGA TCGAGCGCCT GGAGAAGGAC CTGACCCCTG AGATGCGCAA GCACCAGATC 
CCGCTGCTCG GTGACGAGGA GGGGGAGGGC AAAGACTGA
 
Protein sequence
MRCPFCGAPD TRVIDSRLAG EGDQVRRRRE CLSCSERFTT YENAELNMPR VVKRDGSREP 
FNEDKLKSGM THALEKRAVS TDKVEEAVAR IKRKLLGQGE REVDSRRIGE WVMEELRNLD 
QVAYIRFASV YLSFADVQAF REVIERLEKD LTPEMRKHQI PLLGDEEGEG KD