Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1557 |
Symbol | glyA |
ID | 7316181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1671511 |
End bp | 1672764 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643616448 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002513628 |
Protein GI | 220934729 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCCA TCCAGATGGG TATCGCAGGT TATGACGACG AACTCTGGCA GGCCATCGAA TCCGAGGCCC GTCGCCAGGA AGAGCACATC GAGCTGATCG CCTCGGAAAA CTATGCCAGC CCCCGGGTCA TGGAGGCCCA GGGCTCGGTG CTCACCAACA AGTACGCCGA GGGCTACCCC GGCAAGCGCT ACTACGGCGG CTGCGAGTAC GTGGACATCG CCGAGCAGCT GGCCATCGAC CGGGTGAAGC AGTTGTTCGG TGCCGACTAC GCCAACGTGC AGCCCCATTC CGGCTCCCAG GCCAATGCCG CCGTGTACAT GGCCCTGCTC AACCCCGGCG ACACCGTGCT GGGCATGAGT CTTGCCCATG GCGGTCACCT GACCCACGGC GCCAAGGTCA ACTTCTCCGG CAAGATCTAT CACGCCGTCC AGTACGGCAT CGACGACCAG GGCTACATCG ACTTCGACGA GGTGGAGCGC CTGGCCCTGG AACACAAGCC CAAGATGATC GTGGGCGGTT TCTCCGCCTA CTCCCGTGAG ATCGACTGGC AGAAGTTCCG CGACATCGCC GACAAGGTGG GCGCCTACCT GCTGGTGGAC ATGGCCCACG TGGCGGGCCT GGTGGCGGCG GGCATCTACC CGAGCCCGGT GCAGATCGCG GATGTGACCA CCTCGACCAC CCACAAGACC CTGCGCGGCC CCCGCGGCGG CATCATCCTG GCCAAGAGCA ACCCCGACAT CGAGAAGAAG CTCAACTCCC TGGTGTTCCC CGGCACCCAG GGCGGCCCCC TGATGCACGT GATCGCCGCC AAGGCCGTGG CCTTCAAGGA AGCGCTTGAG CCCGGCTTCA AGGACTACCA GAAGCAGGTG GTGGCCAACG CCCGCACCAT GGCCGCCACC CTGATGGAGC GCGGCTACAA GATCGTCTCC GGCGGCACCG ACAACCACCT GTTCCTGGTG GACCTGATCG ACAAGGGCCT GACCGGCAAG GCCGCCGACG CAGCCCTGGG CAATGCCAAC ATCACGGTGA ACAAGAACGC CGTGCCCAAC GACCCCCAGT CCCCGTTCGT CACCAGCGGC ATCCGCATCG GCACCCCCGC CATCACCACC CGCGGCTTCG GCGAGCAGGA ATGCAAGGAC CTGGCCGGCT GGATCTGCGA CGTGCTTGAT GATCACGAGA ACGGCGCGGT CATCGAGCAG GTCAAGGCGA AGGTCCTGGA TGTCTGCGCG CGTTTCCCCG TCTACGGGCA CTGA
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Protein sequence | MFSIQMGIAG YDDELWQAIE SEARRQEEHI ELIASENYAS PRVMEAQGSV LTNKYAEGYP GKRYYGGCEY VDIAEQLAID RVKQLFGADY ANVQPHSGSQ ANAAVYMALL NPGDTVLGMS LAHGGHLTHG AKVNFSGKIY HAVQYGIDDQ GYIDFDEVER LALEHKPKMI VGGFSAYSRE IDWQKFRDIA DKVGAYLLVD MAHVAGLVAA GIYPSPVQIA DVTTSTTHKT LRGPRGGIIL AKSNPDIEKK LNSLVFPGTQ GGPLMHVIAA KAVAFKEALE PGFKDYQKQV VANARTMAAT LMERGYKIVS GGTDNHLFLV DLIDKGLTGK AADAALGNAN ITVNKNAVPN DPQSPFVTSG IRIGTPAITT RGFGEQECKD LAGWICDVLD DHENGAVIEQ VKAKVLDVCA RFPVYGH
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