Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1547 |
Symbol | |
ID | 7316171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1660309 |
End bp | 1661034 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643616438 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_002513618 |
Protein GI | 220934719 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.398737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCCA TATACAACGA CCCCCGTATC ATTATCGCCC TGGATTTTCC GGATGCCGGC CAGGCCCTGG AATTCACCGC CCGGCTGGAT CCCGCTGCCT GTCGTCTCAA GGTAGGCTTC GAACTGTTCG TCAGTGCCGG TCCGGCGCTG GTGGAGAAGC TGGTGGCAGC GGGCTTCGAC GTGTTCCTGG ATCTCAAGTT TCACGACATT CCCAACACCG TCGCCTCCGC CTGCCGGGCA GCAGCCCAGC TCGGCGTGTG GATGATGAAC GTGCACGCCT CCGGCGGCGG CCGCATGCTT CAGGCAGCCC GGGAGGCCCT GGACGGCCAG TCCCACCGCC CCAGGCTCAT CGCCGTGACC GTGCTGACCT CCATGGACGA ACGGGATCTG GATGAGCTGG GGCTTGGCAA GGACGTGGGC CGGCTTGCCG AGGCCCTGGC CGGGCTCGCC GCGGCCAGCG GCCTGGACGG GGTGGTCTGC TCTGCCAGTG AGGCGCCGAT GCTGCGCCAG CGACACGGCG AGGATTTCCT GCTGGTGACC CCGGGCATCC GTCCGCGCAG CGCGGAACAG GATGACCAGC GCCGGGTCAT GACACCGGCC GAGGCCATCC GCGCCGGATC GAGCTACCTG GTGGTGGGCC GTCCCATCAC CCGTGCCGAT TCGCCCATGG AGGTGCTGGA GGCCATGAAC GCGGAGATCC GCGGGGCGCA TTTGCATTCC GTGTAA
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Protein sequence | MPAIYNDPRI IIALDFPDAG QALEFTARLD PAACRLKVGF ELFVSAGPAL VEKLVAAGFD VFLDLKFHDI PNTVASACRA AAQLGVWMMN VHASGGGRML QAAREALDGQ SHRPRLIAVT VLTSMDERDL DELGLGKDVG RLAEALAGLA AASGLDGVVC SASEAPMLRQ RHGEDFLLVT PGIRPRSAEQ DDQRRVMTPA EAIRAGSSYL VVGRPITRAD SPMEVLEAMN AEIRGAHLHS V
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