Gene Tgr7_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1547 
Symbol 
ID7316171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1660309 
End bp1661034 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID643616438 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_002513618 
Protein GI220934719 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.398737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCCA TATACAACGA CCCCCGTATC ATTATCGCCC TGGATTTTCC GGATGCCGGC 
CAGGCCCTGG AATTCACCGC CCGGCTGGAT CCCGCTGCCT GTCGTCTCAA GGTAGGCTTC
GAACTGTTCG TCAGTGCCGG TCCGGCGCTG GTGGAGAAGC TGGTGGCAGC GGGCTTCGAC
GTGTTCCTGG ATCTCAAGTT TCACGACATT CCCAACACCG TCGCCTCCGC CTGCCGGGCA
GCAGCCCAGC TCGGCGTGTG GATGATGAAC GTGCACGCCT CCGGCGGCGG CCGCATGCTT
CAGGCAGCCC GGGAGGCCCT GGACGGCCAG TCCCACCGCC CCAGGCTCAT CGCCGTGACC
GTGCTGACCT CCATGGACGA ACGGGATCTG GATGAGCTGG GGCTTGGCAA GGACGTGGGC
CGGCTTGCCG AGGCCCTGGC CGGGCTCGCC GCGGCCAGCG GCCTGGACGG GGTGGTCTGC
TCTGCCAGTG AGGCGCCGAT GCTGCGCCAG CGACACGGCG AGGATTTCCT GCTGGTGACC
CCGGGCATCC GTCCGCGCAG CGCGGAACAG GATGACCAGC GCCGGGTCAT GACACCGGCC
GAGGCCATCC GCGCCGGATC GAGCTACCTG GTGGTGGGCC GTCCCATCAC CCGTGCCGAT
TCGCCCATGG AGGTGCTGGA GGCCATGAAC GCGGAGATCC GCGGGGCGCA TTTGCATTCC
GTGTAA
 
Protein sequence
MPAIYNDPRI IIALDFPDAG QALEFTARLD PAACRLKVGF ELFVSAGPAL VEKLVAAGFD 
VFLDLKFHDI PNTVASACRA AAQLGVWMMN VHASGGGRML QAAREALDGQ SHRPRLIAVT
VLTSMDERDL DELGLGKDVG RLAEALAGLA AASGLDGVVC SASEAPMLRQ RHGEDFLLVT
PGIRPRSAEQ DDQRRVMTPA EAIRAGSSYL VVGRPITRAD SPMEVLEAMN AEIRGAHLHS
V