| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1546 |
|---|
| Symbol | |
|---|
| ID | 7316170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1659098 |
|---|
| End bp | 1660291 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643616437 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_002513617 |
|---|
| Protein GI | 220934718 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.153552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGT TGCTCTGGCT GCTACTTCCA GTCGCAGCCG CCTCGGGCTG GCTGGCCGCG
CGCCGCACCG GGCGCAAATC CAAACGGACC CTCACTGGCG CCCTGTCCGA GGATTACATC
AAGGGCCTCA ACTATCTGCT GAACGAGCAG TCCGACCGCG CCCTGGCGGT GTTCATCGAC
ATGGTGGACG TGGACTCCGA CACGGTGGAG ACCCATCTCA TCCTGGGCAG CCTGTTTCGT
CGCCGGGGTG AAGTGGATCG CGCCATCCGC ATCCACCAGA ACCTCATTGC ACGCCCCAAC
CTGGAGCCCC GCCAGCGGGC CAATGCCCTG CTGGAACTGG GTCGAGACTA CATGAAGGCG
GGCGTGCTGG ACCGCGCCGA GGGACTGTTT CGGGAACTGA TCAACACCGG CTACCTGGAG
GCCGAGGCCT ATGGCCGTCT CAGGGCGCTC TACGAGCAGG AGAAGGAATG GGAGCGTGCC
ATCTGGGCCG CCGAGCACCT GCGCCGCTTC AGTGCCGAGC CCCAGTATGA ACACATTGCC
CACTATCACT GCGAGCTGGG TGAACAGGCG TTTCGCAACG GCGATCCCGC CAGGGCGGCG
AGCCATGCCC GCAAGGCCCT GTCCAGCGAT CGCAATTGTG CGCGTGCCAG TATCCTGCTG
GGCGATCTGG CGGTGGCTGA ACAGGACGAT CGGCAGGCGC TCAAGCATTT CAGCCGTGTC
CTGGAGCAGC ATCCTGACTT CGCCATCCTG GTGCTTGATC GCGTACGCGC CGCCTATGCC
AGACTCAACG ACAATACTGG CTACGAGCGC TTCCTGGCGC GCCTGCGTGA GCCGGACGCC
TGCCAGACCA CCTTGTTGGC GCATATCGAC GCACTGCATG CGGAAGGGCG GGAAGCGGAG
GTGGATCAGC TCATAGACCA TGAGCTGTCC CGGGGCAAAC TGACCCTGCC GGCACTTCAG
GCCTATCTCA AGATCCAGTC CGGCAGGGCA GAGGATACGG CAGCGGGCGA GGTACTCAAT
CGCGCCGCGC ACGCCCTGGA ACATTACCTG CAACTGCGCC CCTTGTATCG TTGCAACCAT
TGCGGATTCA GTTCGCGCAG CCATTTCTGG TGCTGTCCCG GCTGCCACCA GTGGAGCAGC
ATCAAGCCCC GGGAACTGCA CGCAGAGCGA CCCCAGACGG TCCTGAGCCC CTGA
|
|---|
| Protein sequence | MTELLWLLLP VAAASGWLAA RRTGRKSKRT LTGALSEDYI KGLNYLLNEQ SDRALAVFID
MVDVDSDTVE THLILGSLFR RRGEVDRAIR IHQNLIARPN LEPRQRANAL LELGRDYMKA
GVLDRAEGLF RELINTGYLE AEAYGRLRAL YEQEKEWERA IWAAEHLRRF SAEPQYEHIA
HYHCELGEQA FRNGDPARAA SHARKALSSD RNCARASILL GDLAVAEQDD RQALKHFSRV
LEQHPDFAIL VLDRVRAAYA RLNDNTGYER FLARLREPDA CQTTLLAHID ALHAEGREAE
VDQLIDHELS RGKLTLPALQ AYLKIQSGRA EDTAAGEVLN RAAHALEHYL QLRPLYRCNH
CGFSSRSHFW CCPGCHQWSS IKPRELHAER PQTVLSP
|
|---|
| |