Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1543 |
Symbol | rpsA |
ID | 7316167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1656650 |
End bp | 1658326 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643616434 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_002513614 |
Protein GI | 220934715 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.49794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA GTTTCGCGCA ACTGTTCGAA GAGAGCATGG CCTTCACGCA GATGAAGCCA GGCAGCATCA TCAACGGCAC CGTCATTCAC GTGACGCCCG ACGTGGTGGT GATCAACGCA GGTCTGAAGT CTGAAGGCGT GGTCCCCGCC GACCAGTTCC TCAACGAAAG AGGGGAAATG GAAGTCAAGG TGGGCGACGT GGTCGAGGTG GCTCTCGAGA GCCCCGAAGA CGGCTTCGGT GAAACCCGTC TGTCCCGCGA GAAGGCCAAG CGCGCGAAGG CCTGGGAACG CCTGGAAACC GCCATGGAAA GCGACCAGAC CATCACCGGC ATGATCTCCG GCAAGGTCAA GGGCGGCTTC ACCGTGGAAC TCGGCGACAT CCGCGCCTTC CTTCCCGGTT CCCTCGTCGA TGTGCGCCCG GTGCGCGACA CCGCCTACCT GGAAGGCAAG GAGCTGGAGT TCAAGCTCAT CAAGCTCGAC CAGCGCCGCA ACAACGTCGT TGTCTCCCGC CGCGCCGTGG TGGAGAAGGA ATACAGCGCC GAGCGCGACG AACTGCTCAA GAACCTGCAG GAAGGCATGG TGCTCAAGGG CATCGTCAAG AACCTCACCG ACTACGGTGC GTTCCTGGAC CTGGGCGGCA TCGACGGCCT GCTGCACATC ACCGACATGG CCTGGAAGCG CGTCAAGCAT CCCTCCGAGG TGGTGGAGAT CGGTCAGGAG ATCGAGGTCA AGGTGCTCAA GTTCGACCGC GAGCGTAACC GCGTATCCCT GGGCCTGAAG CAGCTGGGCG ACGACCCGTG GGAGAACATC ACCCGTCGTT ACCCCATCGG CTCCCGCCTG TTCGGCAAGG TCACCAACAT CACCGACTAC GGCTGCTTCG TGGAAATCGA AGACGGCGTG GAAGGCCTGG TGCACGTGTC CGAGATGGAC TGGACCAACA AGAACATCGC CCCCAACAAG ATGGTCGCCG TGGGTGACGA GGTCGAAGTG ATGATCCTCG ACATCGACGA GGAGCGTCGC CGCATCTCCC TGGGCATCAA GCAGTGCAAG GCCAATCCCT GGGACGAGTT CGCCGCCACC CACAACAAGG GTGAGAAGGT CTCCGGCGTG ATCAAGTCCA TCACCGACTT CGGCATCTTC GTGGGCCTGG ACGGTGGCAT CGACGGCCTG GTGCACCTCT CCGACCTGTC CTGGAACATG GAAGGCGAAG AGGCCGTGCG CAACTACAAG AAGGGCGACG AGATCGAGGC CGTGGTGCTG GCCGTGGATC CGGAGCGCGA GCGCATCTCC CTGGGCGTGA AGCAGCTGGA CAAGGACCCC TTCTCCAACT TCGTGGCCGA ACACGCCAAG GGCAGCATCG TCAAGGGCGT GGTCAAGGAA GTGGACGCCA AGGCCGCCAT CGTGGAGTTG GCCGACAGCG TGGATGGCGT GCTGCGCGCC TCCGAACTGT CCCGCGACCG CGTGGAAGAC GTGCGTTCTG TGCTCAACGT GGGCGATACG GTGGAAGCCA AGTTCATGGG CGTGGATCGC AAGAACCGCA CCGTGACCCT GTCCATCAAG GCGAAGGATT ACGCCGAGGA AGCCGAGGCG CTGCAGGACT ACAGCAGCAG CTCCGGCTCC GCCACCACCT CCCTTGGGGA TCTCCTCAAG GAGCAGATGG GCTCCAAGGA CAAGTAA
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Protein sequence | MSESFAQLFE ESMAFTQMKP GSIINGTVIH VTPDVVVINA GLKSEGVVPA DQFLNERGEM EVKVGDVVEV ALESPEDGFG ETRLSREKAK RAKAWERLET AMESDQTITG MISGKVKGGF TVELGDIRAF LPGSLVDVRP VRDTAYLEGK ELEFKLIKLD QRRNNVVVSR RAVVEKEYSA ERDELLKNLQ EGMVLKGIVK NLTDYGAFLD LGGIDGLLHI TDMAWKRVKH PSEVVEIGQE IEVKVLKFDR ERNRVSLGLK QLGDDPWENI TRRYPIGSRL FGKVTNITDY GCFVEIEDGV EGLVHVSEMD WTNKNIAPNK MVAVGDEVEV MILDIDEERR RISLGIKQCK ANPWDEFAAT HNKGEKVSGV IKSITDFGIF VGLDGGIDGL VHLSDLSWNM EGEEAVRNYK KGDEIEAVVL AVDPERERIS LGVKQLDKDP FSNFVAEHAK GSIVKGVVKE VDAKAAIVEL ADSVDGVLRA SELSRDRVED VRSVLNVGDT VEAKFMGVDR KNRTVTLSIK AKDYAEEAEA LQDYSSSSGS ATTSLGDLLK EQMGSKDK
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