| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1523 |
|---|
| Symbol | |
|---|
| ID | 7318010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1632955 |
|---|
| End bp | 1634271 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643616414 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_002513594 |
|---|
| Protein GI | 220934695 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3349] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.834861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCCG TGGATACCGT GGTGGTGGGC GCCGGCTGGT CGGGACTGGC CGCCGCCGTG
GAGCTGACCC GGGCAGGCCG CGAGGTGACC GTGCTGGAAT CCGCGCCCCA GGCCGGCGGG
CGGGCGCGCA GCGTGAGCCT CGGTGACCAG ACCCTGGACA ACGGCCAGCA CATCCTGCTG
GGCGCCTACG GCCATATGCT GGAACTGCTG GGCACGCTGG ACATCCCGGA GGCCGAGGTC
CTGCTGCGCC TGCCTCTGGA CCTGAGCATG CGCGCCCCGG AACACCGCGG CCTGTCCCTG
TCCACCCTGT ACCTGCCGGC TCCCCTGCAC CTGCTGGGCG GACTGCTCTC CGCCCGGGGT
GTGGGCTTCT TCGAGACCCT GGGCGCCCTG CCCGGCATCC GACGCATGCT GGGCTGGGAC
GAGGCCGAGG ACATCACGGT CGCCACCCTG TTGCAGCGCT GCGGCCAGCC CGAGCACCTG
GTCCGCGGAC TCTGGGCGCC CCTGTGCTTG GCGGCCCTCA ATACCCCGCT GGAAACGGCC
TCGGCGCGCT TGTTCACCCG GGTGCTCAAC CTGGCCTTCA CCGGCCATCG CCGTCACTGC
GACCTGCTGA TCCCCCGGGT GGATCTCGAC CGGGTGCTGG CGGAACCGGC GCGGCGTTAT
CTGGAGGCCC GGGGCAGCCG CCTGCTCACC GGCCACCGGG TCACGGCCCT GGAAGCCCTC
GATGGCGGCG GCTTGCGGGT GCGCATGCGG GATCTGGCCG TGGAGGCACG GCACGTGGTG
CTGGCCACCC CCGCCGGGGT GACCGCGGCC CTGTGCACCG GCCTGCCCGG ACTCAAGGAC
GTGGTGCTCG GACTGGAACA CCTGGGCCAC GAACCCATCT GCACGGTCTA CCTGCGCTAT
CCCCCCGAGG TGCGCCTGCC CATGCCCATG GTGGGCGTGC TGGATCTCAC CGCCCAGTGG
ATCTTCGACC GCCGGCACAC CGGCAATCCC GGCGTGATGG CAGTGGTGAT CTCGGGTCCC
GGTCCCCACA TGGAGCTGGA CAACGACGCC CTGACCCGTC AGGTGGCCGC GGAACTGGCC
CTGCTCTACC CGGACTGGCC CGCCGCCGGC GAGACCTGGG TGGTGCGGGA AAAACGCGCC
ACCTTCCAGG CCGCTGCCGG CTGCGAGGCG CACCGTCCCT CCATGCGCAC GGCCCTGCCC
GGCCTGTGGC TGGCCGGGGA TCACGTGCAG AACGGCCTGC CCTCCACCCT CGAAGGGGCG
GTGATCAATG GCTTACAATG CGCCCGCGCC ATCCTCGCCA GCCACCCCGT CACCTGA
|
|---|
| Protein sequence | MRPVDTVVVG AGWSGLAAAV ELTRAGREVT VLESAPQAGG RARSVSLGDQ TLDNGQHILL
GAYGHMLELL GTLDIPEAEV LLRLPLDLSM RAPEHRGLSL STLYLPAPLH LLGGLLSARG
VGFFETLGAL PGIRRMLGWD EAEDITVATL LQRCGQPEHL VRGLWAPLCL AALNTPLETA
SARLFTRVLN LAFTGHRRHC DLLIPRVDLD RVLAEPARRY LEARGSRLLT GHRVTALEAL
DGGGLRVRMR DLAVEARHVV LATPAGVTAA LCTGLPGLKD VVLGLEHLGH EPICTVYLRY
PPEVRLPMPM VGVLDLTAQW IFDRRHTGNP GVMAVVISGP GPHMELDNDA LTRQVAAELA
LLYPDWPAAG ETWVVREKRA TFQAAAGCEA HRPSMRTALP GLWLAGDHVQ NGLPSTLEGA
VINGLQCARA ILASHPVT
|
|---|
| |