| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1522 |
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| Symbol | |
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| ID | 7318009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1632166 |
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| End bp | 1632930 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643616413 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002513593 |
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| Protein GI | 220934694 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.320713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAG AAGAACTGCT CGCCTATCAG CCCGCCCCCG ACCTGCTCAG GGACCGGGTG
ATCCTCGTTA CCGGCGCCGG CATGGGCATC GGCCGCGCCC TGTCCCTGGC CTGCGCGGGA
CTGGGGGCCA CGGTGATCCT GCTGGACAAG GAGATCCGTG CCCTGGAGGC GGTCTATGAC
GAGATCGAGA AGGCGGGTGG CACGCAGCCG GCCATCTACC CCATGAACCT GGAAGGCGCC
ACCGCCAAGG ACCACGAGGA TCTGGCGCAG AACGTGGAAA AGGAACTGGG CCGACTGGAC
GGGCTGGTGC ACAACGCCGG CTGGATCGGC GGCTTCACCC CGCTCAAGCT CTACGACGTG
GAACTCTGGT CACGGGTGAT CACCGCCAAC CTGCACGCCC CCTTCCTGCT CACCCGGGCG
GTGCTGCCGC TGCTGGAGGC GGCCGGGGAT CCTGCGGTGG TGTTCTCCGC CCACGAGAGT
GCAAAGGCCT ACTGGGGCGC CTTCGGCGTG GCCAAGGCGG GCCAGGAGGC GATGCTGAAG
ATCCTCGCCG CCGAGTACCA GGGCGAGCGC TTCATGCGTG TCAACGGCGT GGACTCCGGC
CCCCTGCGCA CCCAGATGCG CGTGCAGCAC TATCCGGGCG AAAACCCCAA CAAGAATCCG
AAACCGGAGA GCGTCATCGC CCCCTACCTG TATTTCCTCG GCCCCGACGC CGGCCGCACC
ACGGGCGAGA TCGTGCGGCT GGAGGGCAAG GTAACGGTCG AGTGA
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| Protein sequence | MTPEELLAYQ PAPDLLRDRV ILVTGAGMGI GRALSLACAG LGATVILLDK EIRALEAVYD
EIEKAGGTQP AIYPMNLEGA TAKDHEDLAQ NVEKELGRLD GLVHNAGWIG GFTPLKLYDV
ELWSRVITAN LHAPFLLTRA VLPLLEAAGD PAVVFSAHES AKAYWGAFGV AKAGQEAMLK
ILAAEYQGER FMRVNGVDSG PLRTQMRVQH YPGENPNKNP KPESVIAPYL YFLGPDAGRT
TGEIVRLEGK VTVE
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