| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1513 |
|---|
| Symbol | |
|---|
| ID | 7318000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1624260 |
|---|
| End bp | 1625360 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643616404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002513584 |
|---|
| Protein GI | 220934685 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01834] poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0557867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT CCAATCCCTT CTCCTCAGAG GACTGGCTGA AGGCCCAGCG CAAGTACTGG
AACGCCTGGT TCGACATGTC GCGCCGGGCC ATGGAGGCCG GCGCGCCTGC GGAAAACCCC
TGGACCGGTG CCCTGGAGCG CTGGTGGCAG GGGGTTTCGC CCGCGGTGGC CCCGGATGCC
CGCGAGTTTT ACGACCGCAT GGTGGGGATG GGGCGCAGCT ACTTCTCCAT GGCCGAGGAG
TTCATGCGCA AGAGCGGCGG TTCCGAGGTC CCCGTGGATG CGTTCAAGAC CTGGATGGAC
CAGCTTTCCG AGGCCCTGCG CAATCCCGCA TCCGGGGCCG ACGCCGCGCC GGGCATGAAG
GATTTCATGG CCTTCTGGCA ACTGCCCATG GATACCTGGC AGCGTTTCGC CTCCTCGGTG
ATGCCGGTGC CGGGCGACCT GATGAAGGCC TTTCAGCCGG AAGGCGCCGC CGCTTTCGGC
GAGGGCATGC GCGAGCACAT GGACCGTTTC CTGTCCATGC CGGGCCTGGG CTACAGCCGC
GAGTCCCAGG CCCAGGTCCA GGACTTCGGC CGGCGACTGC TGGACTATCA GCGTGCCTAC
CAGGCCTACG AGGCCGCCCT CTCCAAGGTC GCCCTGGACT CCGTGGACCG TTTTCGCGCC
CGGCTGGAGG AGGCTTCGCA CCGGGAACAG CCCATCAGTT CCCTGCGCGA ACTGTTCAAC
GAATGGGTGG ATGTCTGCGA AGAGGTCTAC GGAGACTACG CCGTCTCCGA GGAGCACGCC
CGCCACTACG GTGACCTGGT CAACGCCCTC ATGGCCGTGA AACAGGAAGG CTCACGCCTG
GTGGATGAGA CCCTGGAAAC CATGAACATG CCCACCCGGC GCGAGGTGAG CACCCTTCAG
CAGCGCCTCC AGGAGACCCG CCGGGAGATG CAGCGCCTGC GCAGCCAGGT GGAGACACTG
CTCGAGGCCA GGGCCGAGGC ACCCCCACCC GCACAGCCCG CCAGGCCCAA GGCGGCACCG
AAGGCCAAGG CCAGCCGTGC CAAGTCGGCC AAGTCCGCAA AGTCCGCAAA GTCCGCAAAG
ACAGACACCC AGAGGACCTG A
|
|---|
| Protein sequence | MTDSNPFSSE DWLKAQRKYW NAWFDMSRRA MEAGAPAENP WTGALERWWQ GVSPAVAPDA
REFYDRMVGM GRSYFSMAEE FMRKSGGSEV PVDAFKTWMD QLSEALRNPA SGADAAPGMK
DFMAFWQLPM DTWQRFASSV MPVPGDLMKA FQPEGAAAFG EGMREHMDRF LSMPGLGYSR
ESQAQVQDFG RRLLDYQRAY QAYEAALSKV ALDSVDRFRA RLEEASHREQ PISSLRELFN
EWVDVCEEVY GDYAVSEEHA RHYGDLVNAL MAVKQEGSRL VDETLETMNM PTRREVSTLQ
QRLQETRREM QRLRSQVETL LEARAEAPPP AQPARPKAAP KAKASRAKSA KSAKSAKSAK
TDTQRT
|
|---|
| |