Gene Tgr7_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1512 
Symbol 
ID7317999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp1623185 
End bp1624255 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID643616403 
Productpoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 
Protein accessionYP_002513583 
Protein GI220934684 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.117815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCCG TGCAGCTCCG ACCCGACCAG ATCCTGGCCG AACTCAGCGA GTTCCAGACC 
AAGCTGGGCC ATGGAATCCA GAACCTCATG GCGGCCGGTG AAATCCCCAC CGGCGTGACC 
CCCAAGGAGG CCATCTACCA GGAAGACAAG CTCACCCTGT ACCGCTTCCA GCCCTCCACC 
AAAAAGGTGC AGAACCCGGT GCCGGTGCTG ATCGTCTACG CCCTGGTGAA CCGCCCCTAC 
ATGACCGATC TGCAGGAGAA CCGCTCCACG GTGCGCGGCC TGCTGGAGGC GGGGCTGGAC 
GTCTACCTGA TCGACTGGGG CTACCCGGAC CGGGCCGACC GCTTCCTGGG CCTGGACGAC 
TACATCAACG GCTACATCGA CCGCTGCGTG GACGTGATCC GCAGGCGCCA CAAGCTGGAC 
GCCATCAACA TCCTGGGCAT CTGCCAGGGC GGAACCTTCA GCCTCTGCTA CAGCGCCCTG 
CACCCGGAGA AGGTGAAGAA CCTGGTCACC ATGGTCACGC CGGTGGACTT CCACACCCCC 
GACAACATGC TCAGCCGCTG GGTGCGCCAC GTGGACGTGG ACCTGCTGGT GGACACCCTG 
GGCAACATCC CCGGCGAACT GCTCAATGCC ACCTTCCTGA TGCTCAAGCC CTACCGGCTC 
ATCGGCCAGA AATACCTGGA CATGGTGGAC CTGCTTGACG ACAGCAGCCA GGTGAACAAC 
TTCCTGCGCA TGGAGAAATG GATCTTCGAC AGCCCCGACC AGGCAGGCGA GGCCTACCGG 
CAGTTCATCA AGGACTTCTA CCAGCAGAAC AAGCTGATCA ACGGCGGGGT GCAGATCGGC 
GATGCCATGG CGAAACTCGC CAACGTCACC ATGCCGGTGC TCAACATCTT CGCCGAGCAG 
GACCACCTGG TGCCGCCCGC CGCCTCCAAG GCACTGGAAG GCAAGGTGGG CACCAGGGAC 
TACACCGAGC TGTCCTTCCC CGGCGGTCAC ATCGGTATCT ACGTGAGCGG CAAGGCACAG 
AAGCAGGTGC CGCCGGCCAT CGGCGCGTGG CTGGATGAAA GGACGAAGTG A
 
Protein sequence
MIPVQLRPDQ ILAELSEFQT KLGHGIQNLM AAGEIPTGVT PKEAIYQEDK LTLYRFQPST 
KKVQNPVPVL IVYALVNRPY MTDLQENRST VRGLLEAGLD VYLIDWGYPD RADRFLGLDD 
YINGYIDRCV DVIRRRHKLD AINILGICQG GTFSLCYSAL HPEKVKNLVT MVTPVDFHTP 
DNMLSRWVRH VDVDLLVDTL GNIPGELLNA TFLMLKPYRL IGQKYLDMVD LLDDSSQVNN 
FLRMEKWIFD SPDQAGEAYR QFIKDFYQQN KLINGGVQIG DAMAKLANVT MPVLNIFAEQ 
DHLVPPAASK ALEGKVGTRD YTELSFPGGH IGIYVSGKAQ KQVPPAIGAW LDERTK