Gene Tgr7_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1508 
Symbol 
ID7317995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp1618087 
End bp1619247 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content65% 
IMG OID643616399 
Productmethylcitrate synthase 
Protein accessionYP_002513579 
Protein GI220934680 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.83768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG CAGACCTGAG CCAGGCCACG ACGCCAAAGC CGAAAAAATC CGTCGCCCTG 
TCCGGCACGG TGGCGGGAAA CACCGCCATC TGCACCGTGG GGCGCACCGG CAATGACCTG 
CACTACCGGG GCTACGACAT CCTCGATTTC GCCGACATTG CCGAGTTCGA GGAGATTGCC 
TACCTGCTGA TCCACGGCAG CCTGCCCAGC CGCGCAGAAC TGCTCGCCTA CAAGGACCGC 
CTGCGTGCCC TGCGCGGCCT GCCCGCAGCG CTGCGCAACA CCCTGGAGCA GATCCCGCCC 
TCGGCCCATC CCATGGACGT GATGCGCACC GCGGTCTCGG TGCTCGGCGC CCTAGAACCC 
GAGAAGGAGG ACATGAGCGT TTCCGGGGCC CGAGCCATCG GAGACCGGCT GATCGCCTGC 
CTCGGCTCCG CCCTGCTCTA CTGGTATCAC TACGCCCACG ACGGTAAGCG CATCGAGGTG 
GAGACCGACG ACGACAGCAT CGGCGGGCAC TTCCTGCATC TCATGCATGG AAGCACGCCC 
CCGGACATCT GGGTGCGCGC CATGCACACC TCGCTGAACC TCTACGCGGA ACACGAGTTC 
AATGCCTCCA CCTTCACTGC GCGGGTGATC GCCGGCACCA ACGCCGACAT GTACTCGGCC 
CTCACGGGCG CCATCGGCGC CCTGCGCGGG CCGAAACACG GTGGCGCCAA CGAGGTGGCC 
TGCGAGATCC AGCTGCGCTA CCACAACCCC GACGAAGCGG AGGCGGACAT CCGTGAGCGG 
GTGGGTCGCA AGGAGATCAT CATCGGCTTC GGCCATCCCG TGTACACCAC CGGGGATCCG 
CGCAACCAGG TGATCAAGTC AGTGGCACGG CGCCTGTCCG AGGAGCGCGG CACGCTGACC 
ATGTTCGAGG TGGCCGATCG CCTGGAGAGC GTGATGTGGG AGCTGAAGAA GATGTTCCCG 
AATCTCGACT GGTTCTCGGC GGTCTCCTAT CACATGATGG GCATCCCCAC CGCCCTGTTC 
ACGCCCATCT TCGTCATCTC CCGCACCACC GGCTGGGTGG CCCACGTGAT CGAACAGCGC 
CAGGACGGCA AGATCATCCG CCCCAGCGCC AACTACACGG GTCCGGAGAA TCAGCCCTGG 
ATGCCCATGG ACAAGCGTTG A
 
Protein sequence
MSDADLSQAT TPKPKKSVAL SGTVAGNTAI CTVGRTGNDL HYRGYDILDF ADIAEFEEIA 
YLLIHGSLPS RAELLAYKDR LRALRGLPAA LRNTLEQIPP SAHPMDVMRT AVSVLGALEP 
EKEDMSVSGA RAIGDRLIAC LGSALLYWYH YAHDGKRIEV ETDDDSIGGH FLHLMHGSTP 
PDIWVRAMHT SLNLYAEHEF NASTFTARVI AGTNADMYSA LTGAIGALRG PKHGGANEVA 
CEIQLRYHNP DEAEADIRER VGRKEIIIGF GHPVYTTGDP RNQVIKSVAR RLSEERGTLT 
MFEVADRLES VMWELKKMFP NLDWFSAVSY HMMGIPTALF TPIFVISRTT GWVAHVIEQR 
QDGKIIRPSA NYTGPENQPW MPMDKR