| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1499 |
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| Symbol | |
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| ID | 7317985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1603792 |
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| End bp | 1606356 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643616390 |
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| Product | signal transduction protein containing a membrane domain an EAL and a GGDEF domain |
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| Protein accession | YP_002513570 |
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| Protein GI | 220934671 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0164548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAG GCGCAAGATC CACTCACAAG GCTACCCGGC TGCCCAGCCT GCGCAGCCGG
TATGCGCTGC TTTCCGCGCT GGTGGCGACT GTCCTGGTCA GCGGCGCACT GCTGGCCGGC
TGGTACACCC GCGCGGCCAT CCAGGACAAC ACCGACGCCC TGGAGCTGAG CAACCGCGCC
AGGGCATCAC TGGATGAGAT CCGCAACGCC GTGTGGATCG CGGACAACAC CCTCAACGCC
ATGCTGATCA CACCCATGCC CGAGCATGAG GAGGAGATCA CCGGGCAAAT GCTCAAGGCA
CGGGACAGCC TGGACCTCCT GAGGCGCGAC CCGGAGATCC AGGAACCCGA ACTCTCCGCG
CATATCGATG CGCTTCATGT CCGGCTGTCC GATCTCAACA TCGAGGTCCT GCACCTGATC
GAACAGCGCC GAGACCCTGA CTGGGTCTAC CCCCTGCTGC CCTTCCTCAC CGAAAGACTC
CTAATCCCCA ACATCAATTT CGAATCCGCG GCCGATCTGG CACTGCTGGA GATTGCCGAG
ATCGATGGCA GGAGCTACGC ATCTGAACTG TTTGGCGAAT TCGATGAGGT GCGTGACCTG
TGGCGGCGCA TGATTCTCAA CTTCCGCGCC GGCATGATCC GTTACGCGGG TCTCAGCGAG
ACCAGCATCG AGGAACAGGA ACAGAACATC GAGATTCTCT ATCCGGTGAT CATGGAACGC
ATCGCGCGCC TGGAGTCCCG GCGCAGCCGC GGTGAACTGG GCCTCGAGTC CGAGCACGCC
GTGGAGGTCA TGCGCACGGC GGCACAGGAG TGGATGGAAA GCTGGGAGAC CGCCCGTGAG
ATCCGCCGGT CCGAGATCTG GCGGGCCGAT ACCGAGTACC TGAAGGTGGC CGTGCGCCCC
GCCCAGCAGG AGGTCTTCGA CATGCTCTCG GCGGTGGAAA GCGCCATCCT GGACTGGTCG
GCCTACAATA CCACCTCCCT GGAAACGGCA GCCCACCAGA CCGCCTACCA GCTCTGGGCC
CTCACCGGGC TCAGCCTGCT GTTCCTGCTG CTGGTCTATC TGATGCTGGA CCGCTCCGTG
CTGACCCCCA TTCACGGCAT TGCCCGTTCT TTGACCGAGG ATGGCGGTCA CCAGTTGCCC
GGCACAGCCA ACCACAGCAG CCAGGAGATC CAGCAGTTGG TCCGCGCCTT CAAGGCCATG
CAGCGCCAGA TCCATCATCG TCAGAAGGCG CTGGAGCACC AGGCCCTGCA TGACGCGCTC
ACCCGCCTGC CCAACCGGGT CCTGCTCAAC GACCGCCTGG AACAGGCCAT CCAGCTGATG
GAGCGCAACG GGGGCCAGCT GGCCGTGCTG CTGCTGGACC TGGATCGATT CAAGGAGGTC
AACGATGCCC TGGGGCATCC CGTGGGAGAC AAGCTGCTGC AGCAGGTTGC CCGGAGGCTG
CGCACCAGCC TGCGCGGATC GGATACCGTC GCGCGTCTGG GTGGTGACGA ATTCGCCATC
CTGGCGCTCA ATACCGATGG CGCCAGTGCC CTGGAGTTTG CCGGCAAGAT CCACCAGGCG
ATCAGCGGCG TTTTCACCAT CGAACACCAG AACGTGTATG TAGGCACCAG CATCGGCATC
GCGCTGTATC CGGAGCACGG CAACGACGCC AGCAGCCTCA TGCGCCGCGC CGACATCGCC
ATGTACGCGG CCAAGCATCA GGGCCTGGGG AGCTGCATCT ACAGTCCGGA ACAGGACGAG
AACCGTGCGG ACCGCCTGTC CCTGGTGGGT GAACTGCACC AGGAACTGCA GAATCCACGC
AATCTCTGCA TCCACTATCA GCCCCTGGCG GCCCTGCCGT CCGGCAATGC CGCCGGCATG
GAGGCGCTGC TGCGCTGGCA GCATCCGGTG CATGGCCCCA TCCCGCCGGA CGAGATCATC
CGCATGGCGG AACACACGGG ATTGATCGGA CCGCTGACCC GCTGGGTCCT GGTGACCGCC
CTGTGCCAGT TCCGTCAGCT GCTCAAGCAG CATCCTGACC TGACACTCTC CGTCAATCTA
TCCGCCTGGA ATCTTCAGGA TCCCCACCTG CCGGAGGTGG TGAGCGATGC CTTGCGGCAG
TGTGAACTAC CGGCGTTCTC GCTGTGCCTG GAAATCACCG AGAGCGCCAT GATGAACGAT
CCGGTGCACG CCCGTGAACT CCTCAATGTG CTCAGTGATA TGGGCGTGGC GCTGTCCATC
GATGACTACG GCACCGGTTT CTCCTCCCTG AGCTACCTGA AGCTGCTGCC CGTGGATACC
CTGAAGATCG ACCGCTCCTT CGTGATGGAA ATGCTCGAAG ATGAGAACGA TGCCATCATC
GTGCGCTCCA CCATCGACCT CGCACACAAC CTGGGCTACA AGGTGGTGGC CGAGGGCGTG
GAGACCGGCG AGGTGATGAC CCTGCTGGCC GCCCTGGGCT GCGATTATGC CCAGGGTTAC
CACCTGTGCC GGCCGGTTGC CTTCGATGAA ATCCAGGCAT GGCTGGAGCG TTACTCTGGT
GGCGTACCTG CCCACCTGAC CCCGGGCCTG CAGGCCATCA GTTGA
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| Protein sequence | MKQGARSTHK ATRLPSLRSR YALLSALVAT VLVSGALLAG WYTRAAIQDN TDALELSNRA
RASLDEIRNA VWIADNTLNA MLITPMPEHE EEITGQMLKA RDSLDLLRRD PEIQEPELSA
HIDALHVRLS DLNIEVLHLI EQRRDPDWVY PLLPFLTERL LIPNINFESA ADLALLEIAE
IDGRSYASEL FGEFDEVRDL WRRMILNFRA GMIRYAGLSE TSIEEQEQNI EILYPVIMER
IARLESRRSR GELGLESEHA VEVMRTAAQE WMESWETARE IRRSEIWRAD TEYLKVAVRP
AQQEVFDMLS AVESAILDWS AYNTTSLETA AHQTAYQLWA LTGLSLLFLL LVYLMLDRSV
LTPIHGIARS LTEDGGHQLP GTANHSSQEI QQLVRAFKAM QRQIHHRQKA LEHQALHDAL
TRLPNRVLLN DRLEQAIQLM ERNGGQLAVL LLDLDRFKEV NDALGHPVGD KLLQQVARRL
RTSLRGSDTV ARLGGDEFAI LALNTDGASA LEFAGKIHQA ISGVFTIEHQ NVYVGTSIGI
ALYPEHGNDA SSLMRRADIA MYAAKHQGLG SCIYSPEQDE NRADRLSLVG ELHQELQNPR
NLCIHYQPLA ALPSGNAAGM EALLRWQHPV HGPIPPDEII RMAEHTGLIG PLTRWVLVTA
LCQFRQLLKQ HPDLTLSVNL SAWNLQDPHL PEVVSDALRQ CELPAFSLCL EITESAMMND
PVHARELLNV LSDMGVALSI DDYGTGFSSL SYLKLLPVDT LKIDRSFVME MLEDENDAII
VRSTIDLAHN LGYKVVAEGV ETGEVMTLLA ALGCDYAQGY HLCRPVAFDE IQAWLERYSG
GVPAHLTPGL QAIS
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