Gene Tgr7_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1497 
Symbol 
ID7317983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1601941 
End bp1602597 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID643616388 
Productprotein of unknown function DUF330 
Protein accessionYP_002513568 
Protein GI220934669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00498587 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACC GTTCTCTGCT GACCCGTCTC GTTCAGACGA TGCTGACGAT GGCCCTGCTG 
GCAGGTCTGA GCGCGTGCAG TGTCGGGGTC GATCTGCAGC GGCCCGCGCC CGTCAAGCAG 
ACCTTCCTGA TCGAATTGCA GCGCGACAAC ATCCTTGCTC CCGCCACCGC CCCGAGCCTG 
GTCATCGCGC CGGTGCGAAT GGCCAGCGCC TACGAGGGCA GGGCGCTGGT CTACCGCATG 
CAGGACGACC GCTTCGAGTC CGACTACTAC AACCAGTGGT TCACCGCACC GCGGGATCAA 
CTGGGCGAGG CGGTGGCCTA CTGGATGAGG CGCGGCAGCG TGTTCGCTGA CGTGCTGCCA 
CCGACCCTGG CCGGGGAGGC AGACTATCGT CTGGACCTGG TGGTCACGGA TTTCTACGTG 
GATATGCGAG ATGCCGCCGA TCACCGCGCA CGGGTCACAC TGCAGGCCTA TCTCAGCGCG 
CGTGAAACGG CTGGCCGGCG GCTGATCGCG CGTGTGGAAG TGGCAGCGGA CGCCGCGGTG 
GTTCCGGCAG AAGGCGAGTC CGTGGGAAAT GCCCAGTCAC GGGTCACCGC CCTGGCCGAT 
GCCCTGGGCA AGGCACTGGT GAAGCTTGAA ACAAGCCTGG CACAGGCTTT GAACTGA
 
Protein sequence
MNHRSLLTRL VQTMLTMALL AGLSACSVGV DLQRPAPVKQ TFLIELQRDN ILAPATAPSL 
VIAPVRMASA YEGRALVYRM QDDRFESDYY NQWFTAPRDQ LGEAVAYWMR RGSVFADVLP 
PTLAGEADYR LDLVVTDFYV DMRDAADHRA RVTLQAYLSA RETAGRRLIA RVEVAADAAV 
VPAEGESVGN AQSRVTALAD ALGKALVKLE TSLAQALN