| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1489 |
|---|
| Symbol | |
|---|
| ID | 7317975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1593278 |
|---|
| End bp | 1595266 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 662 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643616380 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_002513560 |
|---|
| Protein GI | 220934661 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00458411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC TGTCCCACGC GCCACCCTCT CAGGGCGCAC TGGCCTGGGT GAGCCTCGCC
CTCGCGGTGG TGCTGCTGCC GCACCTGCTC AACCAGCCGG CCTGGGTGGT GGGCCTGGCG
CTGCTGGCGG TGGCCTGGCG CCATGCAGGG GCCCGGGGCC GCCTGCCCCT GCCGGGTCGA
TGGCTGTTGG TGCTCATGGC CATTGCCGCC ACCGCGGGCG TGCTGTTCAG CCAGGGCACC
CTGTTCGGCC GGGATGCCGG TGTATCGCTG CTGATCATCA TGACCGGCCT CAAGATGCTG
GAGACCCGGA CCCACCGGGA TGCCATGCTC AGCATATTCC TGGGCTACTT CGTGGTGATC
ACCCACTTCT TCTACAGCCA GGAAATGCCC GTGGTGGCCT ACCTGATCGT CGCCATGCTG
GTCACCACCA TGGCCCTGAT CCGCCTCAAC GCCGCCGACA CGCCGCCGAC CCTGCGCGAG
CAGCTGGGCC TGGCGGGTCT GATGCTGCTC CAGGCCCTGC CGGTGATGCT CATCCTGTTC
CTGCTGTTCC CGCGCTTGCC CGGACCCCTG TGGGGCATGC CCCAGGAATC CAGCAGCGCC
AGCACCGGGC TCTCCGACTC CATGTCGCCG GGCTCCATCA GCGACCTGCT GCAATCCAAC
GCCACGGCCT TCCGGGTCAC CTTCCCCGAC AACACGCCGC CGCCTCCGAA TCAGCGCTAC
TGGCGCGCCC TGGTGTTCAA CACCTACGAC GGACGCACCT GGCGCGGTTC CTTCCCGCCC
CTGGACACGC CCGATCCCAC GCCTGCGGAC ACCAGCGAGC TGCGCAGCTA CTCGATCATG
CTCGAACCCC ACAACCAGCG CTGGCTGATC GCCCTGGAGA CCCCGGTGGA GGCCCCTTCC
GGCGCGCGGC TCACCCCGGA CTACGTGCTC TCCAGCACCC GCCCGGTGCT GCGCGTCGAG
ACCTACCAGC TGCGCGCCGC CACAGGACAC GCCATGGAGA CGGAACTCAT CCCGGCGCGA
AGGCGCCAGG CCCTGCAGCT GCCCGGTGAT GCACCGGGCG CCCGGGCCCG GGCCCTCGCG
GAACAGTGGC GCACGGAGGA GGAACACCCC GAGGCGATCG TGCAAAGGGC CCTTCAGCAC
TTCAACCAGG AGCCGTTCCG TTACACCCTC TCGCCACCCC GCCTGCCACG GGACCCGGTG
GATGAATTCC TGTTCGATAC CCGCGCGGGA TTCTGCGAAC ACTACGCGGG CAGCTTCGTG
TTCCTGATGC GCGCGGCAGG CATCCCCGCT CGCGTGGTGA CCGGCTACCA GGGCGGTGAG
TGGATCCGCA CCGGCGATTA CCTGCTGGTG CGCCAGTCCG ACGCCCATGC CTGGGCCGAG
GTCTGGCTGG AGGACCGGGG CTGGGTGCGG GTGGATCCCA CCGCAGCCGT GGCCCCGGAA
CGCATCGAAC TTGGCATCCG CGCCGCCCTG AGCGCCGAGG CGGATCTGCC CGATTTCCTC
CGGCAACGGG AAGGCATGGG CCTGGGGCTG ATGGCGCTGC GGTTTCAGCT GGAATACTGG
CGCGACCTGG CCGATTACTA CTGGAACGGC TGGGTGCTCG GCTTCGGTCC GGAGAAACAG
CGTGAGCTCC TCGAGCACCT GGGCCTCGGC TGGCTCGACT GGCGCGGCAT CACCGCCCTC
ATGGTGGCCC TGCTGGCCTT CACCGCCGGC GTGTTCACCC TGGCCTTCCT GTGGCGCAAC
CGCCGCCCCC AGAAAGACCC CCTGGCCCGC CTCTACCAGC GTTTCGCACA GCGCATGACC
CGGCTCGGCA TCCCGCCCCT GCCCCACGAA GGCCCGCGGG ATTTCACCCG CCGTGTCGCA
CGGGAACGCC CGGAACTGCA CGAGGCAGTG GCGGCATTCA CACGCACCTA CGAAGCCCTG
CGCTACGGCT CGGACCCCGA CCCGGACCAG TTCAGTACCC TGCGCCAGGC ACTGCGCGGG
TTGTCCTGA
|
|---|
| Protein sequence | MSRLSHAPPS QGALAWVSLA LAVVLLPHLL NQPAWVVGLA LLAVAWRHAG ARGRLPLPGR
WLLVLMAIAA TAGVLFSQGT LFGRDAGVSL LIIMTGLKML ETRTHRDAML SIFLGYFVVI
THFFYSQEMP VVAYLIVAML VTTMALIRLN AADTPPTLRE QLGLAGLMLL QALPVMLILF
LLFPRLPGPL WGMPQESSSA STGLSDSMSP GSISDLLQSN ATAFRVTFPD NTPPPPNQRY
WRALVFNTYD GRTWRGSFPP LDTPDPTPAD TSELRSYSIM LEPHNQRWLI ALETPVEAPS
GARLTPDYVL SSTRPVLRVE TYQLRAATGH AMETELIPAR RRQALQLPGD APGARARALA
EQWRTEEEHP EAIVQRALQH FNQEPFRYTL SPPRLPRDPV DEFLFDTRAG FCEHYAGSFV
FLMRAAGIPA RVVTGYQGGE WIRTGDYLLV RQSDAHAWAE VWLEDRGWVR VDPTAAVAPE
RIELGIRAAL SAEADLPDFL RQREGMGLGL MALRFQLEYW RDLADYYWNG WVLGFGPEKQ
RELLEHLGLG WLDWRGITAL MVALLAFTAG VFTLAFLWRN RRPQKDPLAR LYQRFAQRMT
RLGIPPLPHE GPRDFTRRVA RERPELHEAV AAFTRTYEAL RYGSDPDPDQ FSTLRQALRG
LS
|
|---|
| |