| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1487 |
|---|
| Symbol | |
|---|
| ID | 7317973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1591235 |
|---|
| End bp | 1592455 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643616378 |
|---|
| Product | cysteine desulfurase IscS |
|---|
| Protein accession | YP_002513558 |
|---|
| Protein GI | 220934659 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000124631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA AGACCCCCAT CTACCTGGAC TATTCCGCGA CCACGCCGGT GGACGAGCGC
GTGGCCGAGG AGATGGCCAA GTACCTGACC CGCGGCGGCA TCTTCGGCAA CCCGGCGTCG
CGTTCCCACG TGTTCGGCTG GGACGCGGAG AAGGCGGTGG AGCGCGCCCG TGAGCAGGTG
GCCGAGCTGG TGGGAGCCGA CCCCCGGGAG ATCGTCTGGA CCAGCGGCGC CACCGAGGCC
AACAACCTGG CCATCAAGGG CGCGGCGCAC TTCTACCAGA AGAAGGGCCG TCACCTGATC
ACCGTCAAGA CCGAGCACAA GGCGGTACTG GACACCTGCC GGCAGCTGGA GCGGGAGGGT
TTCGAGGTCA CCTACCTGGA CGTGCAGTCC AACGGCCTGG TGGACCTGGA GGTGCTGAAA
GCCGCCCTGC GCGAGGACAC GGTGCTGGTG TCGGTGATGC ACGTGAACAA CGAGATCGGC
GTGATCCAGG ACATCGAGGC GATCGGCAAC CTGACCCGGG AGCGTGGCGT ACTGCTGCAC
GTGGACGCGG CGCAGTCCAC CGGCAAGGTG GCCATCGACC TGTCGAGGCT GCCGGTGGAC
CTGATGAGCT TCTCGGCCCA CAAGACCTAC GGCCCCAAGG GCATCGGCGC GCTGTACGTG
CGCAGGAAGC CGCGGGTGCG CATCGAGGCG CAGATGCACG GCGGCGGTCA CGAGCGCGGC
ATGCGTTCCG GGACCCTGGC CCCGCACCAG ATCGTGGGCA TGGGCGAGGC GTTTCGCATC
GCCCGCGAGG AGATGGGTGC CGAGGTGGAG CGCATCCGCA TGCTGCGCGA CCGCCTGTGG
ACGGGCCTCT CGGACATGGA CGAGGTGTAC CTGAACGGCG ACCTGGAGCG GCGCGTGGCG
CACAACCTCA ACGTCTCGTT CAACTTCGTG GAGGGCGAGA GCCTGATCAT GGCGCTCAAG
GACATCGCGG TGAGTTCGGG TTCGGCCTGC ACCAGCGCGA GCCTGGAACC CAGCTACGTG
CTGCGTGCCC TGGGCCGGGA TGACGAGCTG GCGCACAGCT CGATCCGCTT CTCCATGGGC
CGCTACACCA CGAGTGAGGA GGTGGACTAC ACCATCGACC TGGTGAAGAA CGCGGTGGCG
AAGCTGCGCG AGCTCTCGCC CCTGTGGGAG ATGTACCAGG AAGGGGTGGA CCTGAAGAGT
GTGCAGTGGG TGGCGCATTA G
|
|---|
| Protein sequence | MADKTPIYLD YSATTPVDER VAEEMAKYLT RGGIFGNPAS RSHVFGWDAE KAVERAREQV
AELVGADPRE IVWTSGATEA NNLAIKGAAH FYQKKGRHLI TVKTEHKAVL DTCRQLEREG
FEVTYLDVQS NGLVDLEVLK AALREDTVLV SVMHVNNEIG VIQDIEAIGN LTRERGVLLH
VDAAQSTGKV AIDLSRLPVD LMSFSAHKTY GPKGIGALYV RRKPRVRIEA QMHGGGHERG
MRSGTLAPHQ IVGMGEAFRI AREEMGAEVE RIRMLRDRLW TGLSDMDEVY LNGDLERRVA
HNLNVSFNFV EGESLIMALK DIAVSSGSAC TSASLEPSYV LRALGRDDEL AHSSIRFSMG
RYTTSEEVDY TIDLVKNAVA KLRELSPLWE MYQEGVDLKS VQWVAH
|
|---|
| |