Gene Tgr7_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1473 
Symbol 
ID7317084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1578704 
End bp1579117 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID643616364 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_002513544 
Protein GI220934645 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.362759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAC CGTTGAACGA GAAGGGCCTC GCCACGCGCC GTGAAGTGCT GGGTGACGCC 
TACGTGGACC GGGCACTGGA GAATGCCGAT GCCTTTTCCT GGCCCCTGCA GGAACTTGTC 
ACCGGGTTCT GCTGGGATGC GATCTGGAAC CGCCCGGGCC TGCCACGCAA GACCCGCAGT 
CTGATCAACC TGTCCATGCT CATGGCCCTG AACAAGCCCC ACGAGCTCAA GGCCCACGTC 
ATCGGCGCCC TGCGCAACGG CTGCACCCAG GAGGAGATCC GCGAGGTGCT GCTCCAGGGC 
GCCGTCTACT GCGGGGTGCC GGCGGGCGTG GATGCCTTCC GTGTGGCCCG GGAGGCCCTG 
GCGGAGGCGC GTGCCTCGGG GCTGATTCCC GACGCAGGGG AGGGTGACGC TTGA
 
Protein sequence
MMKPLNEKGL ATRREVLGDA YVDRALENAD AFSWPLQELV TGFCWDAIWN RPGLPRKTRS 
LINLSMLMAL NKPHELKAHV IGALRNGCTQ EEIREVLLQG AVYCGVPAGV DAFRVAREAL 
AEARASGLIP DAGEGDA