| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1472 |
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| Symbol | |
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| ID | 7317083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1577716 |
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| End bp | 1578678 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616363 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002513543 |
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| Protein GI | 220934644 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.380445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATCG TGATCCCTGA CGATTACCAG GACTGCGTGC GTGAGCTTGC CTGCTTCCAG
AGGCTCAAGG GTCACCAGGT CACCGTGTAC AACGACACGG TGCGCGATCT GGACACCCTG
GTGGAACGCT TCAGTGACGC CGAGGCCCTG GTGCTGATCC GGGAGCGCAC GCCCATCACC
GAGGCCCTGC TGGAGCGTCT GCCGAAGCTT CGGCTCATCA GCCAGACCGG CAAGGGCATC
GCGCACGTGG ACCTGGATGC CTGTACCCGT CGCGGCGTGG CCGTGGCCAC CGGCATCGGT
GCCCCGTACG CGGCGGCCGA ACTGACCTGG GGCCTGGTGC TCGCCGCCAT GCGCCACATC
CCCGACCAGG TGGCCGCCAT GCGGGCGGGA CGCTGGCAGA CCCGGCTCGG CACGGGCCTG
CGCGGTCGCA CCCTGGGCGT CTTCGGCTAC GGCAAGATCG GTGCACTGGT GGCCGGTTAT
GGCCGCGCCT TCGGCATGAA TGTGCTGGCG TGGGGCCGGG AAGGCAGCCT GGAGCGGGCT
GCGGCCGCGG GCATCGACAC CGCCGAGAGC CAGGAGGACC TGTTCGCCCG CGCCGATGTG
CTGTGCCTGC ACCTGGGGCT GAATCCGGGC ACCCGGGGCA TCGTCAGGGC AGAGCACCTG
GCCCTCATGA AGCCCACGGC CCTGCTGGTG AATACCGCGC GCGCCGAGCT GATCGAGGCC
GATGCCCTGG TGAACGCGCT CAGGGCGGGA CGACCCGGCA TGGCCGCCGT GGATGTCTAC
GAGGACGAAC CGGTGCGCGA TCACCCGCTG CTGCATCTGG ACAACGCCCT GTGCACCCCC
CACCTGGGCT ACGTGGAGCG GGACGGCTAT GAACTCTACT TCGGGGCGGC CTTCGACAAC
GTGCTGGCCT TCGCCGAGGG TTCACCGCGC AATCTGTCCA ATCCAGAAGT GATGCAGGCC
TGA
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| Protein sequence | MHIVIPDDYQ DCVRELACFQ RLKGHQVTVY NDTVRDLDTL VERFSDAEAL VLIRERTPIT
EALLERLPKL RLISQTGKGI AHVDLDACTR RGVAVATGIG APYAAAELTW GLVLAAMRHI
PDQVAAMRAG RWQTRLGTGL RGRTLGVFGY GKIGALVAGY GRAFGMNVLA WGREGSLERA
AAAGIDTAES QEDLFARADV LCLHLGLNPG TRGIVRAEHL ALMKPTALLV NTARAELIEA
DALVNALRAG RPGMAAVDVY EDEPVRDHPL LHLDNALCTP HLGYVERDGY ELYFGAAFDN
VLAFAEGSPR NLSNPEVMQA
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