| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1471 |
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| Symbol | |
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| ID | 7317082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1575403 |
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| End bp | 1577712 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643616362 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_002513542 |
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| Protein GI | 220934643 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTTAC TCAAGAAGAC GCTCACCTCG GAAGTGGCGT ATGTCCTCAT GGGCGCGGCT
TTTCTTGTCG CCCTGTATCA ATACCTGTTC AGCGGTGAGA CGGCCTACCT CTGGCTGGTA
GCGCCGGCGC TTGCGCTGCA GATCGTGCAT CTGCAACTGC ACGGACGCTT CTATCCGGGA
CTTTCTGCCG CCGCGCGACA GACACTCACG CTGGTCTACC TGGGCGTCTG TCTTTACGCC
CTCTATCACC TGTGGCCGGG CATCCATGAC ATCGGTACCT GGCGCCAGAT CGCCCACACC
GATGTGACAT TGTATGTCGG CCTGGCGCTG CTATTACTGG CTGCGGAGAT GCTGCGCCAG
GGCGGCGTGC TCACACTGCG CAACCTCACC TTCATCCTGG GCGCCGTGCT GTTCGTCTCG
CTGATGCATT ATTTCCTCAC CGGTGCCGGC GGACAGCGTT ACCTGGCCGT GCGCCTGGTG
CCCCTGGCGA TGATCATCCA GATTCTGTAC CTGTATCAGA ATCAGTACCT CTACTCCCGT
CTGCCCGCGC TGATCAATCA CACGGCGGTG ATCGTTTATA TCGGTATCTG CCTGTATACG
ACCTACTACC TGACGGCCAA TTTCGAAGAC ATCGCCATCT GGCGCCAGGC GGCCTACACC
ACCCATGACT TCGTGGTCGG TGTGCTGATC TTCCTGGTGG TGATGGAGCT CTCGCGCCTC
ATCCACCCGG TGCTGTTTTG GGTGAACGTG GTGCTGGTGT TCTATGCCCT CTGGGGCCAT
CTCAGCCCCA TCGATTTCTT CTGGCATCCC AGCGTCAACC TGGACCGGAT CATCACCTCC
AGCACGGTGG AATTCTCCAC CGGCGTCTAC GGGCGCTATT CGCAGCTGTC CCTGACCCTG
ATCGCCGCGT TCCTGCTGCT GGCGGCGGTG GCCAGTGGTT TCGGCGCACA GCGCGCCCTG
GTGGACGTGA TGCGAAGGCT CGCCGGTCGC TCGCGCCATA CCATTCCCCA GACCGCGGTG
CTGGCCTCGG TGTCCGTGGG CATGGTGAGC GGCTCCGGCT CCGCCAACAC GGCGGTGACC
GGCAGTTTCA CCATCCCGCT GATGAAGCGT TATGGCGTGC CCGGCACCTT CGCCGGGGCG
GTGGAGACGG CCGCCTCCAT GGGCGGTCTC ATCATGCCGC CGCTGATGGC GGTGGCCGGC
TTCCTCATGG CCGAGTTCCT GGGCGTGCCC TACTGGGACG TGGTGGTGCG CGGTTTCGCC
GTGGCATTCG TCTACTTCGT GTCCCTGATC CTCGCCGTCT ACCTGCTCAG TGTGAGGCTT
CTGCCCAGCA CGCCGATCCA GGTACCGACG GTGCCGCTCT ATGACTGGAT GCGCACCACC
ATCTTCTTCT CGGGGATCAT CTTCCTGATC CTGCTGATGA GCACCTTCGG CTATGGCGCC
CTGCGCGCCG CGCTGTACAC GGCCGGCGCG ATCCTGGCGA TGCTGCTGCT CACCTGGCTG
TACTTCAAGT ACGTGCTCAA GGATCCCAAG CTCCAGGGAG AAACGCTGCT GGGCAACCTG
CGCACGGTGA TCGAGACCCA CGCGGAGATG ACCGCCTACC TGACCCTGCT CATGGCCACC
CTCGGCATCA TGATCGGGCT GTTCACGGTC ACCGGCTTCA TCACCCGCAT GGGTTCCCTG
CTGCTGCAGC TGGGTGATTT CCACATCGTC GCCATGATCC TGATGGCCTG GATCTTCGGC
TGGTTGGTGG GCACCGGTCT GCCGCCCACG GCCACCTACA TCATCGTCGC GGTCATCATC
GTGCCGCCCC TGCGCCAGAT GGGCGTCGAT CCCTGGGTGG CGCATTTCTT CGCCTTCCTG
CTGGCCATCT GGGGCGAGCT CTCGCCACCC ACGTCACTGA CCGCGGCGGT GGCGGCCAAG
ATCGCCGAGG CCTCGTTCAT GAAGACCATG TGGGAGGCGC TCAAGATCTG TCTGCCCATC
ACCATCATGT CCTTCGCAAT TTTCGTGCGC TCTGACATGG TGGTGAACCC GGGCTGGGCC
CAGATCACGG ATACCCTGCT GGTGGCGGCG GGCACGGCGG GCGTGACCTT CGCGACTTTC
GGGCGCTTCT TCGTCACTCG ACTCAACAAC TGGGGCATGC GCATTTTCAT GCTGGCCCTG
TCCCTGGTGG TGGTGTTCTA CCCGCATGAC GGCGTGGCCA CCGTGGCTGC TGTCATCGTG
GTGCCGCTGA TCATCCTCGG TGTGATCCGG CACCGCACGC TGGCGGCGCC GCCGGAGGTT
CCTTCCGCCA GCGCCGCCAC GGGGAAATAG
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| Protein sequence | MSLLKKTLTS EVAYVLMGAA FLVALYQYLF SGETAYLWLV APALALQIVH LQLHGRFYPG
LSAAARQTLT LVYLGVCLYA LYHLWPGIHD IGTWRQIAHT DVTLYVGLAL LLLAAEMLRQ
GGVLTLRNLT FILGAVLFVS LMHYFLTGAG GQRYLAVRLV PLAMIIQILY LYQNQYLYSR
LPALINHTAV IVYIGICLYT TYYLTANFED IAIWRQAAYT THDFVVGVLI FLVVMELSRL
IHPVLFWVNV VLVFYALWGH LSPIDFFWHP SVNLDRIITS STVEFSTGVY GRYSQLSLTL
IAAFLLLAAV ASGFGAQRAL VDVMRRLAGR SRHTIPQTAV LASVSVGMVS GSGSANTAVT
GSFTIPLMKR YGVPGTFAGA VETAASMGGL IMPPLMAVAG FLMAEFLGVP YWDVVVRGFA
VAFVYFVSLI LAVYLLSVRL LPSTPIQVPT VPLYDWMRTT IFFSGIIFLI LLMSTFGYGA
LRAALYTAGA ILAMLLLTWL YFKYVLKDPK LQGETLLGNL RTVIETHAEM TAYLTLLMAT
LGIMIGLFTV TGFITRMGSL LLQLGDFHIV AMILMAWIFG WLVGTGLPPT ATYIIVAVII
VPPLRQMGVD PWVAHFFAFL LAIWGELSPP TSLTAAVAAK IAEASFMKTM WEALKICLPI
TIMSFAIFVR SDMVVNPGWA QITDTLLVAA GTAGVTFATF GRFFVTRLNN WGMRIFMLAL
SLVVVFYPHD GVATVAAVIV VPLIILGVIR HRTLAAPPEV PSASAATGK
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