| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1445 |
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| Symbol | |
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| ID | 7315154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1548270 |
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| End bp | 1549415 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643616335 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_002513517 |
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| Protein GI | 220934618 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0717377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGAAGG GTTCAAAATC GGCGGGGAAC AGTGACTTGC GCGCGGCGGA TCGCCGGCGC
GGGGACCGCC GTGTCCAGCC CATCACGCCA CCCCGTGGCA GCCCCAGCTG GGCCGAACAG
AAGGTCCAGT TCATTACCCG CTACCTGTTC TGGTTCCTCG GCCTGGCCTT CTTCAACCTG
GTGGAGGACA TCGAGCCTGC CTGGATGAGC CTGGCGCAGC TCAACGCGGC CTTTGCCCTC
TATTTCATCC TCCATGCCGG CGTCGTCATC CACGCCTGGC GCCAGCACGA TTGTCCGGCG
CGCTATCGCA TCGCCATGTG GATGGACATC ACCATCGTCT CCGTGGCCGT GCTCAACGAT
CCCTACACCC TCCCCCCCTC CATGCTGGTC TACATCATGG TGGTGCTGGG CAACGGCATG
CGCTACGGCA TGCACATGTT CGCCGAGGCC CTGGCGGTCA GCTTCGGGGC ACTCATGCTG
GTGTTCACCC TGCGCTACAT GGGCAGCGTG CAGGAATTCA CACCCGGCCT GCTGTTCCTG
AACCTGTTCG GCGCCAGCAT CCTGGTCTAC AGCTACCTGC TCATGAACCG CATCGAGCAG
GGCCGCAGCC AGCTGGAGGA ACGCAGCCGT CTGGACACGC TCACCGGGCT GATGAACCGA
CGCGCGCTGC ACGAGTGTTC CGATTACCTG TTCGAGCTGA TCGAGCGCCA GGGTGGCTCG
GTGGTGGTCA TGCTTGCTGA CCTGGACCGC TTCAAGTCCA TCAACGACAG CCTCGGCCAT
GCCCGTGGCG ATGAAGTCCT GCAGGATTTC GCCAATATCC TCCGCGAGTC CCTGCGATCC
ACGGACGTGG CGGCGCGTCT GGGCGGGGAT GAATTCGTGA TGCTGCTGCC GGACACCACC
CTGGACGAGG CGCATGCCGT TGCGGAGCGC ATCCAGGTAC GGGTACGCGC CTACGCCAGC
GACAACGGGC TGGATTTCGG CACCACCCTT GCCATGGGCG AGGCCCCGCT CCATGGCCAC
AATCTGGACG AGATCCTGCC CCGGGTGGAC GCGGCCCTGT ACCAGTCCAA GGGCCGGGAT
GACTGCCCGG GCATCCGCCG GGTCGACCTG GCGCCGGAGC AGGGCATGCT CCCGCTGGAG
ACCTGA
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| Protein sequence | MGKGSKSAGN SDLRAADRRR GDRRVQPITP PRGSPSWAEQ KVQFITRYLF WFLGLAFFNL
VEDIEPAWMS LAQLNAAFAL YFILHAGVVI HAWRQHDCPA RYRIAMWMDI TIVSVAVLND
PYTLPPSMLV YIMVVLGNGM RYGMHMFAEA LAVSFGALML VFTLRYMGSV QEFTPGLLFL
NLFGASILVY SYLLMNRIEQ GRSQLEERSR LDTLTGLMNR RALHECSDYL FELIERQGGS
VVVMLADLDR FKSINDSLGH ARGDEVLQDF ANILRESLRS TDVAARLGGD EFVMLLPDTT
LDEAHAVAER IQVRVRAYAS DNGLDFGTTL AMGEAPLHGH NLDEILPRVD AALYQSKGRD
DCPGIRRVDL APEQGMLPLE T
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