Gene Tgr7_1444 details

Gene Information

• Locus tag: Tgr7_1444
• ID: 7315153
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1542569
• End bp: 1548238
• Gene Length: 5670 bp
• Protein Length: 1889 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643616334
• Product: excinuclease ABC, A subunit
• Protein accession: YP_002513516
• Protein GI: 220934617
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0178] Excinuclease ATPase subunit
• TIGRFAM ID: [TIGR00630] excinuclease ABC, A subunit

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCAGG ACCGCATCCG CATCTTCGGC GCCCGTCAGA ACAACCTGAA GGGCCTGGAT 
CTCGAACTGC CCCTCAATGA ACTGATCGTG GTCACCGGGG TGTCCGGTTC GGGCAAGTCC 
TCGCTGGCCT TCGATACCGT GTACGCCGAG GGCCAGCGCC GTTACGTGGA GACCTTCTCC 
CCCTACGCCC GGCAGTTCCT GGACCGCATG GATAAGCCGG CGGTGGACCG CATCGAGGGC 
GTGTTGCCGG CGATTGCCAT CGACCAGACC AACCCGGTGC GCACCTCCCG CTCCACCGTG 
GGCACCATGA CGGAGCTCAA CGATCACCTG AAACTGCTCT ATGCCCGGGC CGCGCACCTG 
CACTGCCGGG GCTGTGGCAC CCGGGTGCGG TGCGACACCC CGGAGGCCAT TGCCAACGAG 
TGGCTGGAGC GTGCCCACAG GGACGGCACG CGGGTGATGG TGGTGTTCCC GGTGCCGGTG 
CCGGAGAACT TCAGCCTGGA GGAGGTGAAG GGTCACCTGA AGGCCCAGGG CTACGAACGC 
TTTCACGGGG AGACGGATCA GCGCCTGGAG GTGATCCAAG ACCGTCTGCG GGTGGAGCCC 
GGCAACCGGG GCCGCCTGGT GGAGGCCCTG GAGACGGCCC TGCACCACGG CCAGGGCCGG 
GTGCGGGTCT ATCCCCTGGG TGAGGACCGC GAAGCCCTCG CTCCCGTGGA CTATTCCGCC 
GATCTGCACT GCGCCGCCTG CGACCTGCAC TACAGCGAGA CCACCCCCAA TCACTTTTCC 
TTCAACTCGC CCATCGGCGC CTGCGAGGCC TGCCGGGGAT TCGGCCGCAC CATGGGTATC 
GACCTGGACC TGGTGATACC GGACGGGCGG GTGAGCCTTG GCGAGGGTGC GGTGAAGCCC 
TGGCAGACCG ACGCCTACTA CGAGTGCCAG GCGGAGCTGA AGACCTTCGC CCGCAAGCGG 
GGCGTCCCGC TGGACCTGCC CTGGGACGAG CTGAGCGATG ACCAGAAGGC CTGGGTGATC 
GAAGGGGAAG GGGACTTCGA CGACGGGCTC TGGTACGGCA TCCGGCGCTT CTTCGACTGG 
CTGGAGACCA AGAGTTACAA GATGCACATC CGGGTGCTGC TGTCCCGCTA CCGCAGCTAC 
GAGCCCTGCA AGGCCTGCCA GGGCGCCCGC CTCAAGCCTG ACTCACTGCT CTGGCGCCTG 
GGCACGCAGG CCGATGCGGA TGGCGTGCTC GAACCCGGCG CCCGCTTCCT GCCCGCGGGG 
ATCTCATGGT CCCGCGATCT GCTCGAGACC CTGCCGGGCC TGTGCCTGCA CGACCTCATG 
CAGGTGCCCC TGGCGCGCTG CAAGGCCTTC TTCGATCAGC TGCACCTGCC TGCACCCCTG 
GACGAGGCCA CGGACCTGCT GCTCGCCGAG ATCCGCGCGC GCCTGAATTA TCTCTGCGAA 
GTGGGGCTCG GCTATCTCAC CCTGGACCGC CAGTCACGGA CGCTCTCCGG CGGCGAGGTG 
CAGCGCATCA ACCTGACCAC GGCGCTGGGC ACCTCCCTGG TGAACACCCT GTTCGTGCTG 
GACGAGCCTT CCATCGGCCT GCATCCCCGG GACATGGACC GGGTGGTGGG CGTGCTGCGC 
CGGCTGCGGG ATGCGGGCAA TTCCCTGCTG GTGGTGGAAC ACGACCCCCA GGTGATGCGC 
GCCGCCGATC GCATCCTCGA CATGGGACCC GGTCCCGGCG AGCGGGGCGG GGAGGTGGTG 
TTCTTCGGCA CGCCGGCGCA GATCCTGCGT TCGCGCCAGT CCCTCACCGG GCAGTACCTG 
AGCGGCCGCA AGCAGGTGGC CCTGCCGTCC GCAAGCCGCC CACCGGATGG CGACACCGTC 
TGGCTGGAAC TGCGCGGCGC GGCCCAGCAC AACCTCAAGG GCATCGACGC GCGCTTCCCC 
CTGGGGCGCC TGGTGTGCGT CACCGGGGTG TCCGGCTCCG GCAAGTCCAC CCTGATCCAG 
GACCTGCTCT ATCCGGCGCT GGCCAAGCTC AAGGGGCGCC CGGAGTATCC CGCCGGCGCC 
TTCGGCTCCC TGATCGGTCA CGAGTCCCTG GACGCGGTGG TGATGGTGGA CCAGTCCCCC 
ATCGGCCGCA CTGCCCGTTC CTGCCCGGCC AGCTACGTGG GCGCCTTCGA CGCCATCCGC 
AAGCTGTTCG CCGAGGAGCC GCTGGCGAAG GAGCGGGGCT ACACCGCCGG CACCTTCAGC 
TTCAACTCCG GCAATGGCCG CTGCCCGGTG TGCACCGGCT CCGGCTTCGA ACACGTGGAG 
ATGCAGTTTC TCTCCGATGT GTATCTTCGC TGCGGCGAGT GCGACGGCAG GCGCTACCGG 
CCCGAGGTGC TCCAGGTGAA GGCCCTGGGC GCGGAGGGTC ACGCCGCGGA CCTCTCCGGC 
GTGCTGGGAA TGACCGTGAC CGAGGCCCTG GCGTTCTTCG CCCATGTGCC CGAGGTGCAG 
CAGAGCCTGG AACCGCTGGC GGCGGTGGGC CTGGAGTACC TGCGCCTGGG CCAGCCGGTG 
CCGACCCTGT CCGGTGGCGA GGCCCAGCGC CTGAAGCTGG CCGGGCATCT CGTGCAACAC 
GCGGGGAGAA ACGTAGGTCG GGCTTCAGCC CGACATGCCG CAGCTTCAAC GGGCACCGCA 
AGTCGGGCTG AAGCCCGACC CACGGGTGAG CGCGGTGGAA CCCTGTTCCT GCTGGATGAA 
CCCACCACCG GCCTGCACTT CGAGGACATC GCCCGGCTGC TCAAGGCCCT ACGGCGCCTG 
CAGGCACAGG GCCATTCCCT GATCGTGATC GAGCACAACC TGGACGTGAT CCGCGCCGCC 
GACTGGCTCA TCGACCTCGG CCCCGAGGGC GGCGACGGCG GCGGTGAGAT CGTCTGCGAG 
GGCACGCCGG CGCAGGTGAT GAAGCACCCG GGTTCCCATA CCGGCGCGGC CCTGCGCGCC 
GAGGCGGCTG GCAGCATCGC GGAGTCCTCG GCAGCGTCTT ATCGCAAGGC AGCGAAAACG 
GTCCGCGCCG AGATCCGCAT CAGCAATGCC CGGGAACACA ACCTCAAGGG CGTGGACATC 
CAGGTGCCCC GGGACCGCTT CACGGTGATC ACCGGCGTGT CCGGCTCGGG CAAGAGCACC 
GTGGCCTTCG ACATCCTGTT CAACGAGGGC CAGCGTCGCT ACCTGGAATC CCTGAACGCC 
TACGCCCGCT CCCTGGTGCA GCCGGCCTCG CGCCCCGAGG TGGACGCGGT CACCGGCATC 
CCGCCAACCG TGGCCATCGA GCAGCGCACC AGCCGCGGAG GACACAAGAG CACCGTAGGC 
ACCCTCACCG AGGTGCACCA CTTCCTGCGC CTGCTGTACG TGAAACTGGG CACCCAGTAC 
TGCCCGGACT GTGACGTGCC CATCGAGCCC CAGACCCCGG AGGCGATCCT GGCCGCGTTG 
CTCAAGCAGT GGAAGAGCCG GGAGGTGCAC GTGCTGGCGC CCCTGGTTTC CGCGCGCAAG 
GGCTATTACA CGGATCTCGC CCGCTGGGCC CACAACCGGG GCTTCGCCCA CCTGCGCGTG 
GACGGAGAAC TCATCCCCAC GGACCCCTGG CCGCGCCTGG ACCGCTACCG GGAACACGAC 
ATCGAACTGC CGGTGGCGAG CCTCAAAGTG ACGCCCAAGG CCGAGGCTGC GCTGCGCGAG 
GCCATTGCCC GGGGCCTGGA TCTGGGCAAG GGCATGATCC GCGTTGCACC GCTCTCGGGC 
CGCGCCGAGA AACTCTACTC CACGGAACGG GCCTGTCCGT CCTGCGCCCG GTCTTTCGAC 
GTGCCGGACC CGCGCCTGTT CTCCTACAAC GCCCGCCATG GCTGGTGCCG CACCTGCTTC 
GGCACCGGCG TGGTGCTGAA GGGCTTCGAC GAGGCTCACA GCGGCGAGGA AGGGGAGTGG 
CTGGAAGCAG GCGAGTCGCG CCAGACCTGT CCCGCCTGCC ACGGCCAGCG CCTGCGGCCC 
GAGGCCCTGG CGGTGCGTTT CCGGGAACGC TCCATCGGCG AGTTGTCGGC CCTGCCGGTG 
AAGGCGGCAC GCGCCTGGTT CGAGAAACTC AAACCGAAGG CGCGGGAATC CGCCATCGCC 
CGGGACATCC TGCCCGAGAT CCGCGGCCGG CTGGCCTTCC TGGAGCAGGT GGGTCTTGGC 
TATCTCAGCC TGGACCGGGG TGCACCGACG CTCTCCGGCG GCGAGGCCCA GCGTATCCGC 
CTGGCGGCGC AGCTCGGCAC CAACCTGCAG GGGGTCTGCT ACATCCTGGA CGAGCCCACC 
ATCGGCCTGC ACCCCCGGGA CAACCGCATG CTGCTGGACA CCCTGCATCG CCTGCAGGCC 
AAGGGCAACA CCGTGGTGGT GGTGGAGCAC GACGAGGACA CCATCCGCAG CGCGGAACAC 
GTCATCGACC TGGGCCCCGG CGCCGGGGAG CGGGGCGGAC GGCTGGTGGC CCAGGGCAGC 
GTGAAGCAGG TGATGAAGGC GCCCGAGTCC CTCACCGGGC GCTTCCTGGC CCACCCCCTG 
CGACACCCGC TGGTGGCACG GCGGCCCACG AAGGCGGGCC AGGCACCGGC CCTGAGCATC 
GAGGGCGCGT GCCTCAACAA CCTGCGGAAC GTGGCGGTCT CCATTCCGCT CAACCGCCTG 
GTGTGTGTCA CCGGCGTCTC CGGCTCCGGC AAGTCCACCC TGGTGCGGGA GGTGCTGTAC 
CGGAACCTGG CGGAGCGGGT GGGCAAGCGG GGGCGCAAAC CGGCGCTCAC CGGCTGCGCC 
GACCTGGAGG GCTGGCAGGA CCTGGAGCGG GTGCTGGAGG TGGACCAGAC CCCCATCGGG 
CGTACGCCGC GCTCCTGCCC GGCCACCTAC GTGGGCGTGT TCGACCGTAT CCGCAAGCTG 
TACGCCGAGA CCCCCGAGGC GCGCCTCAGG GGCTGGAACG CCTCGCGCTT TTCCTTCAAC 
ACCCCCGGCG GACGCTGTGC CGTGTGCGAG GGGCAGGGGG TGCGGCGCAT CGAGATGAGC 
TTCCTGCCCG ACGTGGTGGT GCCCTGCGAG GCCTGCGGCG GCGGGCGCTA CGGCCGGGAG 
ACCCTGGAGG CGCGCTTCAA GGACCGCTCC ATCGCCGATG TGCTGAACAT GAGCGTGGAC 
GAGGCCGTGC CGTTTTTCAC CGCCCACCCG GCCATCCACC ACGCGCTGCA ATTGCTCCAG 
GACGTGGGCC TGGGTTACCT GCGTCTGGGC CAGCCCAGCC CGACCCTGTC CGGCGGCGAG 
GCCCAGCGCA TGAAGCTGGT CACGGAACTT TCGAGAAGCG GCAAGACCTT CGCCAACACC 
GTAGGTCGGG CTTCAGCCCG ACAGCCCGAG GCTTGGACAG GCATTGCAAG TCGGGCTGAA 
GCCCGACCTA CGGCACGGCC TTCGGGCCAG GCACGCTCAC GCGGCAGTCT CTACATCCTG 
GACGAGCCCA CCGTGGGCCT GCACATGGCC GACGTGGAGA AGCTCATCCG CGTGCTGCAT 
CGGCTGGTGG AGGCGGGACA CTCGGTGATC GTCATCGAGC ACAACCTGGA CGTGATCGCG 
GAAGCCGACT GGATCATTGA CATGGGGCCC GAGGGGGGCG ACGGCGGCGG GCGCGTGGCG 
GGGCAGGGCA CGCCCGAGAG CATGGTGCGC CGCAAATCAC ATACCGGGCG CATGCTGGGA 
GCGTTTCTGG CGGGTCGTAG CGGTGCGTGA 

 

Protein sequence

MSQDRIRIFG ARQNNLKGLD LELPLNELIV VTGVSGSGKS SLAFDTVYAE GQRRYVETFS 
PYARQFLDRM DKPAVDRIEG VLPAIAIDQT NPVRTSRSTV GTMTELNDHL KLLYARAAHL 
HCRGCGTRVR CDTPEAIANE WLERAHRDGT RVMVVFPVPV PENFSLEEVK GHLKAQGYER 
FHGETDQRLE VIQDRLRVEP GNRGRLVEAL ETALHHGQGR VRVYPLGEDR EALAPVDYSA 
DLHCAACDLH YSETTPNHFS FNSPIGACEA CRGFGRTMGI DLDLVIPDGR VSLGEGAVKP 
WQTDAYYECQ AELKTFARKR GVPLDLPWDE LSDDQKAWVI EGEGDFDDGL WYGIRRFFDW 
LETKSYKMHI RVLLSRYRSY EPCKACQGAR LKPDSLLWRL GTQADADGVL EPGARFLPAG 
ISWSRDLLET LPGLCLHDLM QVPLARCKAF FDQLHLPAPL DEATDLLLAE IRARLNYLCE 
VGLGYLTLDR QSRTLSGGEV QRINLTTALG TSLVNTLFVL DEPSIGLHPR DMDRVVGVLR 
RLRDAGNSLL VVEHDPQVMR AADRILDMGP GPGERGGEVV FFGTPAQILR SRQSLTGQYL 
SGRKQVALPS ASRPPDGDTV WLELRGAAQH NLKGIDARFP LGRLVCVTGV SGSGKSTLIQ 
DLLYPALAKL KGRPEYPAGA FGSLIGHESL DAVVMVDQSP IGRTARSCPA SYVGAFDAIR 
KLFAEEPLAK ERGYTAGTFS FNSGNGRCPV CTGSGFEHVE MQFLSDVYLR CGECDGRRYR 
PEVLQVKALG AEGHAADLSG VLGMTVTEAL AFFAHVPEVQ QSLEPLAAVG LEYLRLGQPV 
PTLSGGEAQR LKLAGHLVQH AGRNVGRASA RHAAASTGTA SRAEARPTGE RGGTLFLLDE 
PTTGLHFEDI ARLLKALRRL QAQGHSLIVI EHNLDVIRAA DWLIDLGPEG GDGGGEIVCE 
GTPAQVMKHP GSHTGAALRA EAAGSIAESS AASYRKAAKT VRAEIRISNA REHNLKGVDI 
QVPRDRFTVI TGVSGSGKST VAFDILFNEG QRRYLESLNA YARSLVQPAS RPEVDAVTGI 
PPTVAIEQRT SRGGHKSTVG TLTEVHHFLR LLYVKLGTQY CPDCDVPIEP QTPEAILAAL 
LKQWKSREVH VLAPLVSARK GYYTDLARWA HNRGFAHLRV DGELIPTDPW PRLDRYREHD 
IELPVASLKV TPKAEAALRE AIARGLDLGK GMIRVAPLSG RAEKLYSTER ACPSCARSFD 
VPDPRLFSYN ARHGWCRTCF GTGVVLKGFD EAHSGEEGEW LEAGESRQTC PACHGQRLRP 
EALAVRFRER SIGELSALPV KAARAWFEKL KPKARESAIA RDILPEIRGR LAFLEQVGLG 
YLSLDRGAPT LSGGEAQRIR LAAQLGTNLQ GVCYILDEPT IGLHPRDNRM LLDTLHRLQA 
KGNTVVVVEH DEDTIRSAEH VIDLGPGAGE RGGRLVAQGS VKQVMKAPES LTGRFLAHPL 
RHPLVARRPT KAGQAPALSI EGACLNNLRN VAVSIPLNRL VCVTGVSGSG KSTLVREVLY 
RNLAERVGKR GRKPALTGCA DLEGWQDLER VLEVDQTPIG RTPRSCPATY VGVFDRIRKL 
YAETPEARLR GWNASRFSFN TPGGRCAVCE GQGVRRIEMS FLPDVVVPCE ACGGGRYGRE 
TLEARFKDRS IADVLNMSVD EAVPFFTAHP AIHHALQLLQ DVGLGYLRLG QPSPTLSGGE 
AQRMKLVTEL SRSGKTFANT VGRASARQPE AWTGIASRAE ARPTARPSGQ ARSRGSLYIL 
DEPTVGLHMA DVEKLIRVLH RLVEAGHSVI VIEHNLDVIA EADWIIDMGP EGGDGGGRVA 
GQGTPESMVR RKSHTGRMLG AFLAGRSGA