| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1443 |
|---|
| Symbol | |
|---|
| ID | 7315152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1541391 |
|---|
| End bp | 1542257 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643616333 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002513515 |
|---|
| Protein GI | 220934616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0616469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG ACACCGAACT CAAAGACGTG CTGGCACAGT TTTCCCGGCT CATGGACCGG
GCGGAGCAGC TCTTGCCTGC GCCGAGGCAG GAGCCGGACT GGACCGCACC CGCCCATCGC
TGGCACCGGG ACGGGCACCT CTCGCCGGTG CACGGGATCG CGCCCCTGGC CCTGGACGAT
CTGCTGCATA TCGAGCGTCA GAAGGTCCAG CTGGTGCGCA ACACCCGCCA GTTCCTTAAA
CGCCTGCCCG CCAACAACGT GCTCCTGTGG GGCGCCCGGG GCACGGGCAA GTCCTCGCTG
ATGCGCGCGC TGCTCAATGA ATACCGGGAC GAGGGGCTGC GCATCATCCA GGTGGACGGC
CAGGACCTGG TGCACCTGCC GGAGATCGCC CTGCCCCTGG CGGGACGCCC GGAGCGCTTC
ATCCTGCTGG CGGATGACCT TTCCTTCGAG GCCAGCGACC CGGGCTACAA GGCGCTCAAG
GCCATGCTGG ACGGATCCCT GGAAGGCACG CCGGAGAACG TGTTGATCCA CGCCACTTCC
AACCGGCGCC ACCTGATGCC AGAGAAGATG CTGGACAACC TGGAGGTGAA GCGGGTAGAT
GACGAGATCC ATCCCGGTGA GGCGGTGGAG GAGAAGATCT CCCTGTCGGA ACGCTTCGGC
CTGTGGCTGG CCTTCCATCC CTTCAACCAG GACCAGTACC TGGCGGTGGT GGCCCACTGG
CTCACCCGCC TTGGCTGCAT TGAAACGGAA GATAGCCGTG CCGAGGCCTT GCGCTATGCC
TTGGGCCGAG GCTCACGCAG CGGCCGCGTC GCTTGGCAGT TCGCGCGGGA CTGGGCGGGG
CAGAAGGGTT TGGAGATCGG CGGTTGA
|
|---|
| Protein sequence | MTDDTELKDV LAQFSRLMDR AEQLLPAPRQ EPDWTAPAHR WHRDGHLSPV HGIAPLALDD
LLHIERQKVQ LVRNTRQFLK RLPANNVLLW GARGTGKSSL MRALLNEYRD EGLRIIQVDG
QDLVHLPEIA LPLAGRPERF ILLADDLSFE ASDPGYKALK AMLDGSLEGT PENVLIHATS
NRRHLMPEKM LDNLEVKRVD DEIHPGEAVE EKISLSERFG LWLAFHPFNQ DQYLAVVAHW
LTRLGCIETE DSRAEALRYA LGRGSRSGRV AWQFARDWAG QKGLEIGG
|
|---|
| |